Job Description P18335 Confidence 99.97% Date Thu Jan 5 11:36:49 GMT 2012 Rank 72 Aligned Residues 349 % Identity 13% Template c3op7A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase class i and ii; PDBTitle: crystal structure of a plp-dependent aminotransferase (zp_03625122.1)2 from streptococcus suis 89-1591 at 1.70 a resolution Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.
Query SS confidence																																																																								.	.	.
Query Sequence		K	G	Q	G	S	R	I	W	D	Q	Q	G	K	E	Y	V	D	F	A	G	G	I	A	V	T	A	L	G	H	C	H	P	A	L	V	N	A	L	K	T	Q	G	E	T	L	W	H	I	S	N	V	F	T	N	E	P	A	L	R	L	G	R	K	L	I	E	A	T	F	A	.	.	.	E	R	V	V	F	M	N
Query Conservation																																																																								.	.	.
Alig confidence																						.	.	.							.																.	.																								.	.	.
Template Conservation																						.	.	.							.																.	.
Template Sequence		V	H	E	N	S	A	I	Y	D	I	A	G	V	S	I	S	S	L	T	L	.	.	.	E	E	L	F	A	L	.	S	G	T	N	P	E	D	F	Y	K	K	L	Q	G	T	.	.	K	L	N	Y	G	W	I	E	G	S	P	A	F	K	K	S	V	S	Q	L	Y	T	G	V	K	P	E	Q	I	L	Q	T	N
Template Known Secondary structure				G	G	G		S							S							.	.	.							.		T												T	S	.	.			S	S			T	T											T	T	S	S	S			G	G	G					S
Template Predicted Secondary structure																						.	.	.							.																.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.				.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	T	E	A	N	E	T	A	F	K	L	A	R	H	Y	A	C	V	R	H	S	P	F	K	T	K	I	I	A	F	H	N	A	F	H	G	R	S	L	F	T	V	S	V	G	G	Q	P	K	Y	S	D	G	F	G	P	K	P	A	D	I	I	H	V	P	F	N	D	L	H	A	V	K	A	V	M	D	D	H
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Template Sequence		G	A	T	G	A	N	L	L	V	L	Y	S	L	.	.	.	.	.	.	.	.	I	E	P	G	D	H	V	I	S	L	Y	P	T	Y	Q	Q	L	Y	D	I	P	K	S	L	G	A	E	V	D	.	.	.	.	.	.	L	W	Q	I	E	E	E	N	G	W	L	P	D	L	E	K	L	R	Q	L	I	R	P	T
Template Known Secondary structure															.	.	.	.	.	.	.	.			T	T								S	S		T									T	T					.	.	.	.	.	.						G	G	G	T	T													T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100									.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.							130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	C	A	V	V	V	E	P	I	Q	G	E	G	G	V	T	A	A	T	P	E	F	L	Q	G	L	R	E	L	C	D	Q	H	Q	A	L	L	V	F	D	E	V	Q	C	G	M	G	R	T	G	D	L	F	A	Y	M	H	Y	G	V	T	P	D	I	L	T	S	A	K	A	L	G	G	G	F	P	I	S	A	M
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		T	K	X	I	C	I	N	N	A	N	N	P	T	G	.	A	V	X	D	R	T	Y	L	E	E	L	V	E	I	A	S	E	V	G	A	Y	I	L	S	D	E	V	Y	R	S	F	S	E	L	D	V	P	S	I	I	E	V	Y	D	K	G	I	A	V	N	S	L	S	T	Y	S	L	P	G	I	R	I	G	W	V
Template Known Secondary structure									S	S		T	T	T		.																	T	T	T									S				S	S	S										T	T											S		G	G	G
Template Predicted Secondary structure																.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	T	A	E	I	A	S	A	F	H	P	G	S	H	G	S	T	Y	G	G	N	P	L	A	C	A	V	A	G	A	A	F	D	I	I	N	T	P	E	V	L	E	G	I	Q	A	K	R	Q	R	F	V	D	H	L	Q	K	I	D	Q	Q	Y	D	V	F	S	D	I	R	G	M	G	L	L	I	G	A	E	L
Query Conservation
Alig confidence																																				.	.
Template Conservation																																				.	.
Template Sequence		A	A	N	H	Q	V	T	D	I	L	R	D	Y	R	D	Y	T	X	I	C	A	G	V	F	D	D	L	V	A	Q	L	A	L	A	.	.	H	Y	Q	E	I	L	E	R	N	R	H	I	L	E	E	N	L	A	I	L	D	Q	W	I	E	E	E	P	L	V	S	Y	I	R	P	A	V	V	S	T	S	F	V	K
Template Known Secondary structure												T	T	T	G	G	G	T	T	S																.	.	T																											T	T							S	S	S	S
Template Predicted Secondary structure																																				.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.			.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.					.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure																											.	.	.	.
Query SS confidence																											.	.	.	.
Query Sequence		K	P	Q	Y	K	G	R	A	R	D	F	L	Y	A	G	A	E	A	G	V	M	V	L	N	A	.	.	.	.	G	P	D	V	M	R	F	A	P	S	L	V	V	E	D	A	D	I	D	E	G	M	Q	R	F	A	H	A	V	A	K	V
Query Conservation																											.	.	.	.
Alig confidence																											.	.	.	.								.	.
Template Conservation																																						.	.
Template Sequence		I	A	V	D	X	P	X	E	D	F	C	L	Q	L	L	Q	E	H	G	V	L	L	V	P	G	N	R	F	E	R	D	G	Y	V	R	L	.	.	G	F	A	C	E	Q	E	T	L	I	K	G	L	E	K	L	S	Q	F	L	R	R	F
Template Known Secondary structure					S	S																				G	G	G	G	T		T	T					.	.				S																	G	G	G
Template Predicted Secondary structure																																						.	.
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.			.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions