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Job DescriptionP18335
Confidence100.00%DateThu Jan 5 11:36:49 GMT 2012
Rank52Aligned Residues356
% Identity14%Templatec3jtxB_
PDB info PDB header:transferaseChain: B: PDB Molecule:aminotransferase; PDBTitle: crystal structure of aminotransferase (np_283882.1) from neisseria2 meningitidis z2491 at 1.91 a resolution
Resolution1.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.........50.........60.........70.........80. ........90........
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Query Sequence  APAEFIPVKGQGSRIWDQQGKEYVDFAGGIAVTALGHCHPALVNALKTQGETLWHISNVF. TNEPALRLGRKLIEATF. .
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Template Sequence  KPYPFARLHEAXQGISAPEGXEAVPLHIG. . EPKHPT. PKVITDALTASLHELEKYPLTAGLPELRQACANWLKRRYDGL
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   910.........20.........30....... ..40... ......50.........60.........70.........80.....
 
   99100.........110.........120.........130.........140.........150.........160.........170....
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Query Sequence  . . . . AERVVFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFN
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Template Sequence  TVDADNEILPVLGSREALFSFVQTVLNPVG. . . . . IKPAIVSPNPFYQIYE. GATLLGGGEIHFANCPAP. . . . . . SFNP
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TTTSSS




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   86...90.........100.........110..... ....120.........130. ........140......... 150...
 
   175....180.........190.........200.........210.........220.........230.........240.. ...
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Query Sequence  DLHAVKAVMDDHTCAVVVEPIQGEGGVTAATPEFLQGLRELCDQHQALLVFDEVQCGMGRTGDLFAYM. . . . . . . . . HYG
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Template Sequence  DWRSISEEVWKRTKLVFVCSPNNPSG. SVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQ
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TTTT

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   156...160.........170.........180. ........190.........200.........210.........220.........230....
 
   246...250.........260.........270.........280.........290.........300.........310.........320.....
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Query Sequence  VTPDILTSAKALGGGFPISAMLTTAEIASAFHPGSHGSTYGGNPLACAVAGAAFDIINTPEVLEGIQAKRQRFVDHLQKI
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Template Sequence  KLLXFTSLSRSNVPGLRSGFVAGDAELLKNFLLYRTYHGSAXSIPVQRASIAAWD. . . DEQHVIDNRRLYQEKFERVIPI
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   235....240.........250.........260.........270.........280......... 290.........300.........310.
 
   326...330.........340.........350.........360.........370. ........380.........390...
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Query Sequence  DQQYDVFSDIRGMGLLIGAELKPQYKGRARDFLYAGAEAGVMVLNA. . . . . . . . . . . . GPDVMRFAPSLVVEDADIDEGM
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Template Sequence  LQQVFDVKLPDA. SFYIWLKV. . PDGDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRI. . ALVADVATCVKAA
Template Known Secondary structure  TTTS




SS.SS
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   313......320.... .....330.. .......340.........350.........360.........370.... .....380.......
 
   394.....400.
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Query Sequence  QRFAHAVA
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Template Sequence  EDIVSLYR
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   388.390.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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