Job Description P18335 Confidence 100.00% Date Thu Jan 5 11:36:49 GMT 2012 Rank 5 Aligned Residues 398 % Identity 25% Template c3i5tB_ PDB info PDB header:transferase Chain: B: PDB Molecule:aminotransferase; PDBTitle: crystal structure of aminotransferase prk07036 from rhodobacter2 sphaeroides kd131 Resolution 2.00 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20							.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.
Query Sequence		A	I	T	R	A	T	F	D	E	V	I	L	P	I	.	.	.	.	.	.	Y	A	P	A	E	F	I	P	V	K	G	Q	G	S	R	I	W	D	Q	Q	G	K	E	Y	V	D	F	A	G	G	I	A	V	T	A	L	G	H	C	H	P	A	L	V	N	A	L	K	T	Q	G	E	T	L	W	H	I	S	N	V
Query Conservation																.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	G	A	A	M	R	D	H	I	L	L	P	A	Q	E	M	A	K	L	G	K	S	A	Q	P	V	L	T	H	A	E	G	I	Y	V	H	T	E	D	G	R	R	L	I	D	G	P	A	G	M	W	C	A	Q	V	G	Y	G	R	R	E	I	V	D	A	M	A	H	Q	A	M	V	L	P	Y	A	S	P	W
Template Known Secondary structure														T	T			G	G	G	T	T	T											B	T					T	T							T	T					T		T	T		B																					T	T
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
			81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure		.																		.	.
Query SS confidence		.																		.	.
Query Sequence		.	F	T	N	E	P	A	L	R	L	G	R	K	L	I	E	A	T	.	.	F	A	E	R	V	V	F	M	N	S	G	T	E	A	N	E	T	A	F	K	L	A	R	H	Y	A	C	V	R	H	S	P	F	K	T	K	I	I	A	F	H	N	A	F	H	G	R	S	L	F	T	V	S	V	G	G	Q	P	K	Y
Query Conservation		.																		.	.
Alig confidence		.																		.	.
Template Conservation
Template Sequence		Y	M	A	T	S	P	A	A	R	L	A	E	K	I	A	T	L	T	P	G	D	L	N	R	I	F	F	T	T	G	G	S	T	A	V	D	S	A	L	R	F	S	E	F	Y	N	N	V	L	G	R	P	Q	K	K	R	I	I	V	R	Y	D	G	Y	H	G	S	T	A	L	T	A	A	C	T	G	R	T	G	N
Template Known Secondary structure		T															T	T	S	S	T	T								S	S																			T	T		T	T								T	T					S	S						T				G	G	G
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.																	.	.	.	.	.	.	180	.	.	.					.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Query Sequence		S	D	G	F	G	P	K	P	A	D	I	I	H	V	P	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	L	H	A	V	K	A	V	M	.	.	.	.	D	D	H	T	C	A	V	V	V	E	P	I	Q	G	E	G	G	V	T	A	A	T	P	E	F	L	Q	G	L	R	E	L	C	D
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template Conservation
Template Sequence		W	P	N	F	D	I	A	Q	D	R	I	S	F	L	S	S	P	N	P	R	H	A	G	N	R	S	Q	E	A	F	L	D	D	L	V	Q	E	F	E	D	R	I	E	S	L	G	P	D	T	I	A	A	F	L	A	E	P	I	L	A	S	G	G	V	I	I	P	P	A	G	Y	H	A	R	F	K	A	I	C	E
Template Known Secondary structure			T	T	S					T	T									G	G	G		T	T	S																						G	G	G								S	S	B	T	T	T	T	S	B				T	T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280								.	.	.	.	.	.	.	.
Predicted Secondary structure																											.																				.																				.	.	.	.	.	.	.
Query SS confidence																											.																				.																				.	.	.	.	.	.	.
Query Sequence		Q	H	Q	A	L	L	V	F	D	E	V	Q	C	G	M	G	R	T	G	D	L	F	A	Y	M	.	H	Y	G	V	T	P	D	I	L	T	S	A	K	A	L	G	G	G	F	.	P	I	S	A	M	L	T	T	A	E	I	A	S	A	F	H	P	G	S	.	.	.	.	.	.	.	H	G	S	T	Y	G	G	N
Query Conservation																											.																				.																				.	.	.	.	.	.	.
Alig confidence																											.																				.																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	H	D	I	L	Y	I	S	D	E	V	V	T	G	F	G	R	C	G	E	W	F	A	S	E	K	V	F	G	V	V	P	D	I	I	T	F	A	K	G	V	T	S	G	Y	V	P	L	G	G	L	A	I	S	E	A	V	L	A	R	I	S	G	E	N	A	K	G	S	W	F	T	N	G	Y	T	Y	S	N	Q
Template Known Secondary structure			T	T								T	T	T	T	T	T	T	T	S	S	S						T	T					S						G	G	G	G	T	T	S	S														T	T	S	G	G	G		T	T								T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.				.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.
Query SS confidence																																																																			.	.	.
Query Sequence		P	L	A	C	A	V	A	G	A	A	F	D	I	I	N	T	P	E	V	L	E	G	I	Q	A	K	R	Q	R	F	V	D	H	L	Q	K	I	D	Q	Q	Y	D	V	F	S	D	I	R	G	M	G	L	L	I	G	A	E	L	K	P	Q	Y	K	G	R	.	.	.	A	R	D	F	L	Y	A	G	A	E	A	G
Query Conservation																																																																			.	.	.
Alig confidence																																							.																												.	.	.
Template Conservation																																							.
Template Sequence		P	V	A	C	A	A	A	L	A	N	I	E	L	M	E	R	E	G	I	V	D	Q	A	R	E	M	A	D	Y	F	A	A	A	L	A	S	L	.	R	D	L	P	G	V	A	E	T	R	S	V	G	L	V	G	C	V	Q	C	L	L	G	T	A	E	D	K	A	F	T	L	K	I	D	E	R	C	F	E	L	G
Template Known Secondary structure																		T	T																		T	T	.	T	T	S	T	T								T	T																											T	T
Template Predicted Secondary structure																																							.
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.		.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	V	L	N	A	G	P	D	V	M	R	F	A	P	S	L	V	V	E	D	A	D	I	D	E	G	M	Q	R	F	A	H	A	V	A	K	V	V	G	A
Query Conservation
Alig confidence									.
Template Conservation									.
Template Sequence		L	I	V	R	P	L	G	.	D	L	C	V	I	S	P	P	L	I	I	S	R	A	Q	I	D	E	M	V	A	I	M	R	Q	A	I	T	E	V	S	A	A
Template Known Secondary structure								T	.	T								T	T
Template Predicted Secondary structure									.
Template SS confidence
		415	.	.	.	.	420	.		.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.