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Job DescriptionP18335
Confidence99.90%DateThu Jan 5 11:36:49 GMT 2012
Rank195Aligned Residues311
% Identity10%Templatec3hl2D_
PDB info PDB header:transferaseChain: D: PDB Molecule:o-phosphoseryl-trna(sec) selenium transferase; PDBTitle: the crystal structure of the human sepsecs-trnasec complex
Resolution2.81 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   84.....90.........100 .........110.........120.........130.........140.........150.........160
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Query Sequence  EPALRLGRKLIEATFAE. . . RVVFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDG
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Template Sequence  KITNSLVLDIIKLAGVHTVANCFVVPMATGMSLTLCFLTLRHKR. . . . . PKAKYIIWPRIDQKSCFKSMITAGFEPVVIE
Template Known Secondary structure  T
TT

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TT

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   116...120.........130.........140.........150......... 160.........170.........180.........190
 
   161........170.........180.........190.........200.........210.........220.........230..... ..
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Query Sequence  FGPKPADIIHVPFNDLHAVKAVMDDHTCAVVVEPIQGEGGVTAATPEFLQGLRELCDQHQALLVFDEVQCGMGRT. . . GD
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Template Sequence  NVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDR. . . . LEELAVICANYDIPHIVNNAYGVQSSKCMHLI
Template Known Secondary structure 
TT


GGGSS

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TT
TT
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   191........200.........210.........220.........230.... .....240.........250.........260......
 
   238.240.........250.........260......... 270.........280.........290.........300.........310......
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Query Sequence  LFAYMHYGVTPDILTSAKALGGGFPISAMLTT. AEIASAFHPGSHGSTYGGNPLACAVAGAAFDIINTPEVLEGIQAKRQ
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Template Sequence  QQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQEISKMYPGRASASPSLDVLITLLSLGSNGYKKLLKERKEMFS
Template Known Secondary structure  S


S


SS
S
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B
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   267..270.........280.........290.........300.........310.........320.........330.........340......
 
   317..320.........330 .........340........ .350.........360.........370.
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Query Sequence  RFVDHLQKIDQQYD. VFSDIRGMGLLIGAELKP. . . QYKGRARDFLYAGAEAGVMVLNA. . . . . . . . . . . . . . . . . . . . .
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Template Sequence  YLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFRGFMSHT
Template Known Secondary structure  TT

B


TT
SS
TT

TTTS

TT

S

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   347..350.........360.........370.........380.........390.........400.........410.........420......
 
   372.......380.........390.........400...
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Query Sequence  . . . GPDVMRFAPSLVVEDADIDEGMQRFAHAVAKV
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Template Sequence  NNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKAV
Template Known Secondary structure  S

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TT

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   427..430.........440.........450.........460.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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