Phyre 2 alignment of P18335 with c3ffhA

Job Description P18335
Confidence 99.94% Date Thu Jan 5 11:36:49 GMT 2012

Rank 143 Aligned Residues 321

% Identity 11% Template c3ffhA_

PDB info PDB header:transferase Chain: A: PDB Molecule:histidinol-phosphate aminotransferase; PDBTitle: the crystal structure of histidinol-phosphate aminotransferase from2 listeria innocua clip11262.

Resolution 2.31 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence	K	E	Y	V	D	F	A	G	G	I	A	V	T	A	L	G	H	C	H	P	A	L	V	N	A	L	K	T	Q	G	E	T	L	W	H	I	S	N	V	F	T	N	E	P	A	L	R	L	G	R	K	L	I	E	A	T	F	A	E	R	V	V	F	M	N	S	G	T	E	A	N	E	T	A	F	K	L	A	R	H
Query Conservation
Alig confidence										.	.							.														.	.	.	.																			.	.																								.	.
Template Conservation										.	.							.														.	.	.	.																			.	.																								.	.
Template Sequence	T	K	I	T	K	L	S	S	N	.	.	E	N	P	L	G	T	.	S	K	K	V	A	A	I	Q	A	N	S	S	V	.	.	.	.	E	T	E	I	Y	A	S	S	L	R	K	E	V	A	D	F	Y	Q	.	.	L	E	E	E	E	L	I	F	T	A	G	V	D	E	L	I	E	L	L	T	R	V	L	.	.
Template Known Secondary structure	S						S	S		.	.	S		T	T			.										T			S	.	.	.	.				B														T	.	.			G	G	G					S	S													.	.
Template Predicted Secondary structure										.	.							.														.	.	.	.																			.	.																								.	.
Template SS confidence
	29	30	.	.	.	.	.	.	.			.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.					.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.			.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.

	122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence	Y	A	C	V	R	H	S	P	F	K	T	K	I	I	A	F	H	N	A	F	H	G	R	S	L	F	T	V	S	V	G	G	Q	P	K	Y	S	D	G	F	G	P	K	P	A	D	I	I	H	V	P	F	N	D	L	H	A	V	K	A	V	M	D	D	H	T	C	A	V	V	V	E	P	I	Q	G	E	G	G	V
Query Conservation
Alig confidence	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.																																		.
Template Conservation	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.																																		.
Template Sequence	.	.	.	.	.	.	L	D	T	T	T	N	T	V	X	A	T	P	T	F	V	Q	Y	R	Q	N	A	L	I	E	G	A	E	V	R	E	I	P	.	.	.	.	.	.	.	.	L	L	Q	D	G	E	H	D	L	E	G	X	L	N	A	I	D	E	K	T	T	I	V	W	I	C	N	P	N	N	P	T	G	.
Template Known Secondary structure	.	.	.	.	.	.		S	T	T								S	S												T								.	.	.	.	.	.	.	.			T	T	S													T	T								S	S		T	T	T		.
Template Predicted Secondary structure	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.																																		.
Template SS confidence
							102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.									.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.

	202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.			.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.								.
Query SS confidence																																																			.	.								.
Query Sequence	T	A	A	T	P	E	F	L	Q	G	L	R	E	L	C	D	Q	H	Q	A	L	L	V	F	D	E	V	Q	C	G	M	G	R	T	G	D	L	F	A	Y	M	H	Y	G	V	T	P	D	I	L	.	.	T	S	A	K	A	L	G	.	G	G	F	P	I	S	A	M	L	T	T	A	E	I	A	S	A	F	H	P
Query Conservation																																																			.	.								.
Alig confidence																																																			.	.								.
Template Conservation
Template Sequence	N	Y	I	E	L	A	D	I	Q	A	F	L	D	R	V	P	S	D	V	L	V	V	L	D	E	A	Y	I	E	Y	V	T	P	Q	P	E	K	H	E	K	L	V	R	T	Y	K	N	L	I	I	T	R	T	F	S	K	I	Y	G	L	A	S	A	R	V	G	Y	G	I	A	D	K	E	I	I	R	Q	L	N	I
Template Known Secondary structure													T	T	S		T	T	S							T	T	G	G	G		S	S						G	G	G	G	G	T		T	T							S	S	S	T	T			S	S
Template Predicted Secondary structure
Template SS confidence
	167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

	279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	G	S	H	G	S	T	Y	G	G	N	P	L	A	C	A	V	A	G	A	A	F	D	I	I	N	T	P	E	V	L	E	G	I	Q	A	K	R	Q	R	F	V	D	H	L	Q	K	I	D	Q	Q	Y	D	V	F	S	D	I	R	G	M	G	L	L	I	G	A	E	L	K	P	Q	Y	K	G	R	A	R	D	F	L
Query Conservation
Alig confidence			.	.																			.	.	.																																												.	.	.	.
Template Conservation			.	.																			.	.	.																																												.	.	.	.
Template Sequence	V	R	.	.	P	P	F	N	T	T	S	I	G	Q	K	L	A	I	E	A	I	K	.	.	.	D	Q	A	F	I	G	E	C	R	T	S	N	A	N	G	I	K	Q	Y	E	A	F	A	K	R	F	E	K	V	K	L	Y	P	A	N	G	N	F	V	L	I	D	L	.	.	.	.	G	I	E	A	G	T	I	F
Template Known Secondary structure	T		.	.		S				B													.	.	.																											T	T								S	S							.	.	.	.	S	S
Template Predicted Secondary structure			.	.																			.	.	.																																												.	.	.	.
Template SS confidence
	247	.			.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.				.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.					310	.	.	.	.	.	.	.

	359	360	.	.	.	.	.	.	.	.	.	370	.					.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure														.	.	.	.
Query SS confidence														.	.	.	.
Query Sequence	Y	A	G	A	E	A	G	V	M	V	L	N	A	.	.	.	.	G	P	D	V	M	R	F	A	P	S	L	V	V	E	D	A	D	I	D	E	G	M	Q	R	F	A	H	A	V
Query Conservation														.	.	.	.
Alig confidence														.	.	.	.											.	.	.
Template Conservation																												.	.	.
Template Sequence	S	Y	L	E	K	N	G	Y	I	T	R	S	G	A	A	L	G	F	P	T	A	V	R	I	T	I	G	.	.	.	K	E	E	D	N	S	A	V	I	A	L	L	E	K	L	L
Template Known Secondary structure						T	T						T	T	T	T	T		T	T								.	.	.
Template Predicted Secondary structure																												.	.	.
Template SS confidence
	318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.				.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

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Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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