Phyre 2 alignment of P18335 with c3eucB

Job Description P18335
Confidence 99.94% Date Thu Jan 5 11:36:49 GMT 2012

Rank 137 Aligned Residues 320

% Identity 15% Template c3eucB_

PDB info PDB header:transferase Chain: B: PDB Molecule:histidinol-phosphate aminotransferase 2; PDBTitle: crystal structure of histidinol-phosphate aminotransferase2 (yp_297314.1) from ralstonia eutropha jmp134 at 2.05 a resolution

Resolution 2.05 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.
Query SS confidence																																																															.	.	.
Query Sequence	Q	Q	G	K	E	Y	V	D	F	A	G	G	I	A	V	T	A	L	G	H	C	H	P	A	L	V	N	A	L	K	T	Q	G	E	T	L	W	H	I	S	N	V	F	T	N	E	P	A	L	R	L	G	R	K	L	I	E	A	T	F	A	E	.	.	.	R	V	V	F	M	N	S	G	T	E	A	N	E	T	A
Query Conservation																																																															.	.	.
Alig confidence													.	.						.	.												.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Conservation													.	.						.	.												.	.	.	.	.	.	.	.	.	.
Template Sequence	P	D	S	H	G	L	V	K	L	D	A	X	.	.	E	N	Y	R	L	.	.	P	P	A	L	R	S	E	L	A	A	R	.	.	.	.	.	.	.	.	.	.	L	G	E	V	S	S	E	A	L	R	A	K	L	K	E	V	X	Q	V	P	A	G	X	E	V	L	L	G	N	G	S	D	E	I	I	S	X	L
Template Known Secondary structure				T	T	S				S	S	S	.	.						.	.												.	.	.	.	.	.	.	.	.	.																		T			T	T
Template Predicted Secondary structure													.	.						.	.												.	.	.	.	.	.	.	.	.	.
Template SS confidence
	26	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.											.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.

	116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	F	K	L	A	R	H	Y	A	C	V	R	H	S	P	F	K	T	K	I	I	A	F	H	N	A	F	H	G	R	S	L	F	T	V	S	V	G	G	Q	P	K	Y	S	D	G	F	G	P	K	P	A	D	I	I	H	V	P	F	N	D	L	H	A	V	K	A	V	M	D	D	H	T	C	A	V	V	V	E	P	I
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.																	.																						.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.																	.																						.	.	.	.	.	.
Template Sequence	A	L	A	.	.	.	.	.	.	.	.	A	A	R	P	G	A	K	V	X	A	P	V	P	G	F	V	.	X	Y	A	X	S	A	Q	F	A	G	L	E	F	V	G	V	P	L	R	A	D	.	.	.	.	.	.	F	T	L	D	R	G	A	X	L	A	A	X	A	E	H	Q	P	A	I	V	Y	L	A	Y	P
Template Known Secondary structure				.	.	.	.	.	.	.	.	T			T	T								S				.									T	T										T	T	.	.	.	.	.	.																		S						S	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.																	.																						.	.	.	.	.	.
Template SS confidence
	101	.	.									.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140							.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.

	196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence	Q	G	E	G	G	V	T	A	A	T	P	E	F	L	Q	G	L	R	E	L	C	D	Q	H	.	.	Q	A	L	L	V	F	D	E	V	Q	C	G	M	G	R	T	G	D	L	F	A	Y	M	H	Y	G	V	T	P	D	I	L	T	S	A	K	A	L	G	G	G	F	P	I	S	A	M	L	T	T	A	E	I	A
Query Conservation																									.	.
Alig confidence						.																			.	.
Template Conservation						.
Template Sequence	N	N	P	T	G	.	N	L	F	D	A	A	D	X	E	A	I	V	R	A	A	Q	G	S	V	C	R	S	L	V	V	V	D	E	A	Y	Q	P	F	A	Q	E	S	W	X	S	R	L	T	D	F	G	N	L	L	V	X	R	T	V	S	K	L	G	L	A	G	I	R	L	G	Y	V	A	G	D	P	Q	W	L
Template Known Secondary structure		T	T	T		.															T	B	T	T	S		B								T	T			S	S	S			S	G	G	G	G	G	T		T	T										T	T		S	S
Template Predicted Secondary structure						.
Template SS confidence
	166	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

	274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	S	A	F	H	P	G	S	H	G	S	T	Y	G	G	N	P	L	A	C	A	V	A	G	A	A	F	D	I	I	N	T	P	E	V	L	E	G	I	Q	A	K	R	Q	R	F	V	D	H	L	Q	K	I	D	Q	Q	Y	D	V	F	S	D	I	R	G	M	G	L	L	I	G	A	E	L	K	P	Q	Y	K	G	R
Query Conservation
Alig confidence							.	.																				.	.	.																																													.	.	.	.	.
Template Conservation							.	.																				.	.	.																																													.	.	.	.	.
Template Sequence	E	Q	L	D	K	V	.	.	R	P	P	Y	N	V	N	V	L	T	E	A	T	A	L	F	A	L	E	.	.	.	H	V	A	V	L	D	E	Q	A	A	Q	L	R	A	E	R	S	R	V	A	E	G	X	A	A	H	G	G	V	T	V	F	P	S	A	A	N	F	L	L	A	R	V	P	.	.	.	.	.	D
Template Known Secondary structure				G	G	G	.	.	S		T	T		S													T	.	.	.																									T	S	T	T							S	S	S							S	.	.	.	.	.
Template Predicted Secondary structure							.	.																				.	.	.																																													.	.	.	.	.
Template SS confidence
	245	.	.	.	.	250			.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.				270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.						.

	354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.							.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure																				.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.
Query Sequence	A	R	D	F	L	Y	A	G	A	E	A	G	V	M	V	L	N	A	G	.	.	.	.	.	.	P	D	V	M	R	F	A	P	S	L	V	V	E	D	A	D	I	D	E	G	M	Q	R	F	A	H	A	V	A
Query Conservation																				.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.										.	.	.
Template Conservation																																			.	.	.
Template Sequence	A	A	Q	T	F	D	R	L	L	A	R	K	V	L	I	K	N	V	S	K	X	H	P	L	L	A	N	C	L	R	V	T	V	S	.	.	.	T	P	E	E	N	A	Q	F	L	E	A	F	A	A	S	L	Q
Template Known Secondary structure											T	T							T	T	S		G	G	G	T	T								.	.	.
Template Predicted Secondary structure																																			.	.	.
Template SS confidence
	315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.				.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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