Return to main results Retrieve Phyre Job Id

Job DescriptionP18335
Confidence99.95%DateThu Jan 5 11:36:49 GMT 2012
Rank118Aligned Residues337
% Identity16%Templatec3eleB_
PDB info PDB header:transferaseChain: B: PDB Molecule:amino transferase; PDBTitle: crystal structure of amino transferase (rer070207001803) from2 eubacterium rectale at 2.10 a resolution
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   44.....50.........60.........70..... ....80.........90........ .100.........110...
Predicted Secondary structure 









......









....



Query SS confidence 































. . . . . .






















. . . .














Query Sequence  YVDFAGGIAVTALGHCHPALVNALKTQGETLW. . . . . . HISNVFTNEPALRLGRKLIEATF. . . . AERVVFMNSGTEANE
Query Conservation   

         


  
 
  
         ......             

  
    
....        


 
  
Alig confidence 






..





.















......






















....














Template Conservation 

 
  
.. 
    .   
  
               
    
   

 


       
     
 
  
 
 
 

 
Template Sequence  VYDFSIG. . NPSIPA. PQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYXTXGAAASLS
Template Known Secondary structure 




..


S

.
S
S


TT






GGGSS
Template Predicted Secondary structure 



..





.


























Template SS confidence 















































































   36...40.. ...... .50.........60.........70.........80.........90.........100.........110..
 
   114.....120.........130.........140.........150.........160.........170.........180.........190...
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  TAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFNDLHAVKAVMDDHTCAVVVE
Query Conservation   

  
              

      

                               
   
          



Alig confidence 






.......
































.......

























Template Conservation       
 .......   

 

   
            
     
  .......                      
   
Template Sequence  ICFRALT. . . . . . . SDAYDEFITIAPYFPEYKVFVNAAGARLVEVPA. . . . . . . DTEHFQIDFDALEERINAHTRGVIIN
Template Known Secondary structure 
.......
STT
SS

TTTT


.......
TTTSS

T

TT
Template Predicted Secondary structure  .......













.......












Template SS confidence 















































































   113...... 120.........130.........140.........150.. .......160.........170........
 
   194.....200.........210.........220 .........230....... ..240.........250........ .260....
Predicted Secondary structure 













......











..








.





Query SS confidence 


























. . . . . .
















. .




















.





Query Sequence  PIQGEGGVTAATPEFLQGLRELCDQHQ. . . . . . ALLVFDEVQCGMGRTGD. . LFAYMHYGVTPDILTSAKALG. GGFPIS
Query Conservation        
        
  
  
    
......  

 

   
 
  
 ..           

 
 

 
 . 
    
Alig confidence 






.


















......
















..




















.





Template Conservation   
 



.       
  
             
                             
   
 

     




Template Sequence  SPNNPSG. TVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIG
Template Known Secondary structure  SS
TTT
.



TS


TTTT
B
TT




GGGT
SSSTTTSS
GGG

Template Predicted Secondary structure 






.













































Template SS confidence 















































































   179180..... ....190.........200.........210.........220.........230.........240.........250.......
 
   265....270.........280.........290.........300.........310.........320.........330.........340....
Predicted Secondary structure 



















Query SS confidence 















































































Query Sequence  AMLTTAEIASAFHPGSHGSTYGGNPLACAVAGAAFDIINTPEVLEGIQAKRQRFVDHLQKIDQQYDVFSDIRGMGLLIGA
Query Conservation                     
         
                           
            
   
    
Alig confidence 















































































Template Conservation                                                               
   
     
  
     
Template Sequence  YVLVPDEVYDKAELYAAVCGAGRALGYVCAPSLFQKXIVKCQGATGDINAYKENRDLLYEGLTRIGYHCFKPDGAFYXFV
Template Known Secondary structure 

TTSTTTT


S
TT
TT



T



SBSS
Template Predicted Secondary structure 



















Template SS confidence 















































































   258.260.........270.........280.........290.........300.........310.........320.........330.......
 
   345....350.........360.........370. ........380.........390.........400...
Predicted Secondary structure 






....







Query SS confidence 


























. . . .































Query Sequence  ELKPQYKGRARDFLYAGAEAGVMVLNA. . . . GPDVMRFAPSLVVEDADIDEGMQRFAHAVAKV
Query Conservation              
   
   

   
 ....
   


      
 
 

  
  
  

  
Alig confidence 

...





















....






..






















Template Conservation    ...           
   

 
 


 
     


..
     
 
      
   
   
Template Sequence  KA. . . LEDDSNAFCEKAKEEDVLIVAADGFGCPGWVRI. . SYCVDREXIKHSXPAFEKIYKKY
Template Known Secondary structure 
...SSS
TT
GGGGT
TT..

S
Template Predicted Secondary structure 
...














..


Template SS confidence 






























































   338. 340.........350.........360.........370.. .......380.........390.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions