Job Description P18335 Confidence 99.85% Date Thu Jan 5 11:36:49 GMT 2012 Rank 215 Aligned Residues 323 % Identity 10% Template c3e77A_ PDB info PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase; PDBTitle: human phosphoserine aminotransferase in complex with plp Resolution 2.50 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.										.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.		.	.	110	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.																		.	.	.								.
Query SS confidence																																									.	.	.	.	.	.	.	.	.																		.	.	.								.
Query Sequence		V	D	F	A	G	G	I	A	V	T	A	L	G	H	C	H	P	A	L	V	N	A	L	K	T	Q	G	E	T	L	W	H	I	S	N	V	F	T	N	.	.	.	.	.	.	.	.	.	E	P	A	L	R	L	G	R	K	L	I	E	A	T	F	A	E	.	.	.	R	V	V	F	M	N	S	.	G	T	E	A
Query Conservation																																									.	.	.	.	.	.	.	.	.																		.	.	.								.
Alig confidence									.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.																		.	.	.								.
Template Conservation									.	.	.	.	.	.	.	.
Template Sequence		L	Y	F	Q	S	M	L	.	.	.	.	.	.	.	.	P	H	S	V	L	L	E	I	Q	K	E	L	L	D	Y	K	G	V	G	I	S	V	L	E	M	S	H	R	S	S	D	F	A	K	I	I	N	N	T	E	N	L	V	R	E	L	L	A	V	P	D	N	Y	K	V	I	F	L	Q	G	G	G	C	G	Q
Template Known Secondary structure					S				.	.	.	.	.	.	.	.											T	S	S	S	G	G	G	S	S	S		T	T	T			T	T	S																			T			T	T							S	S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.									.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	T	A	F	K	L	A	R	H	Y	A	C	V	R	H	S	P	F	K	T	K	I	I	A	F	H	N	A	F	H	G	R	S	L	F	T	V	S	V	G	G	Q	P	K	Y	S	D	G	F	G	P	K	P	A	D	I	I	H	V	P	F	N	D	L	H	A	V	K	A	V	M	D	D	H	T	C	A	V	V
Query Conservation
Alig confidence							.	.	.	.	.	.																														.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.																														.	.	.	.	.	.
Template Sequence		F	S	A	V	P	.	.	.	.	.	.	L	N	L	I	G	L	K	A	G	R	C	A	D	Y	V	V	T	G	A	W	S	A	K	A	A	E	E	A	K	.	.	.	.	.	.	K	F	G	T	I	N	I	V	H	P	K	L	G	S	Y	T	K	I	P	D	P	S	T	W	N	L	N	P	D	A	S	Y	V	Y
Template Known Secondary structure							.	.	.	.	.	.				G	G	G	S	T	T									S											T	.	.	.	.	.	.	T	T	S						S				S	S	S		S				G	G	G					T	T		S
Template Predicted Secondary structure							.	.	.	.	.	.																														.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.							.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.							.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	P	I	Q	G	E	G	G	V	T	A	A	T	P	E	F	L	Q	G	L	R	E	L	C	D	Q	H	Q	A	L	L	V	F	D	E	V	Q	C	G	M	G	R	T	G	D	L	F	A	Y	M	H	Y	G	V	T	P	D	I	L	T	S	A	K	A	L	G	G	G	F	P	I	S	A	M	L	T	T	A	E
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.																							.	.	.	.	.																		.
Template Conservation															.	.	.	.	.	.	.	.	.																							.	.	.	.	.																		.
Template Sequence		Y	C	A	N	E	T	V	H	G	V	E	F	D	.	.	.	.	.	.	.	.	.	F	I	P	D	V	K	G	A	V	L	V	C	D	M	S	S	N	F	L	S	K	P	.	.	.	.	.	V	D	V	S	K	F	G	V	I	F	A	G	A	Q	K	N	V	.	G	S	A	G	V	T	V	V	I	V	R	D	D
Template Known Secondary structure				S			T	T	T	T				S	.	.	.	.	.	.	.	.	.	S					T	T								T	T	T	T	T	S	S		.	.	.	.	.			G	G	G		S						G	G	G	T	T	.	S		T	T								T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.																							.	.	.	.	.																		.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.										.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.						.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.													.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.																																																							.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.																																																							.
Query Sequence		I	A	S	A	F	H	P	G	S	H	G	S	T	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	G	N	P	L	A	C	A	V	A	G	A	A	F	D	I	I	N	T	P	E	V	L	E	G	I	Q	A	K	R	Q	R	F	V	D	H	L	Q	K	I	D	Q	Q	Y	D	V	F	S	D	I	R	G	M	.
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.																																																							.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.																																																							.
Template Conservation
Template Sequence		L	L	G	F	A	L	R	E	C	P	S	V	L	E	Y	K	V	Q	A	G	N	S	S	L	Y	N	T	P	P	C	F	S	I	Y	V	M	G	L	V	L	E	W	I	K	N	N	G	G	A	A	A	M	E	K	L	S	S	I	K	S	Q	T	I	Y	E	I	I	D	N	S	Q	G	F	Y	V	C	P	V	E	P
Template Known Secondary structure		S		S				T	T	S		G	G	G							T	T	T	T		S	S																				T	T																						T	S	T	T	S					S		G
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
						339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.			.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.			.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure		.	.	.	.																	.	.																						.	.
Query SS confidence		.	.	.	.																	.	.																						.	.
Query Sequence		.	.	.	.	G	L	L	I	G	A	E	L	K	P	Q	Y	K	G	R	A	.	.	R	D	F	L	Y	A	G	A	E	A	G	V	M	V	L	N	A	G	P	D	V	.	.	M	R	F	A	P	S	L	V	V	E	D	A	D	I	D	E	G	M	Q	R	F	A	H	A	V	A	K
Query Conservation		.	.	.	.																	.	.																						.	.
Alig confidence		.	.	.	.																	.	.																						.	.
Template Conservation
Template Sequence		Q	N	R	S	K	M	N	I	P	F	R	I	G	N	A	K	G	D	D	A	L	E	K	R	F	L	D	K	A	L	E	L	N	M	L	S	L	K	G	H	R	S	V	G	G	I	R	A	S	L	Y	N	A	V	T	I	E	D	V	Q	K	L	A	A	F	M	K	K	F	L	E	M
Template Known Secondary structure		G	G	B		S	S							S	S	T	T																T	T			S		B			T	T	T		S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions