Job Description P18335 Confidence 99.97% Date Thu Jan 5 11:36:49 GMT 2012 Rank 79 Aligned Residues 345 % Identity 15% Template c3e2yB_ PDB info PDB header:transferase, lyase Chain: B: PDB Molecule:kynurenine-oxoglutarate transaminase 3; PDBTitle: crystal structure of mouse kynurenine aminotransferase iii in complex2 with glutamine Resolution 2.26 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.				.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.						.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																																							.	.	.																								.	.	.	.	.
Query SS confidence																																							.	.	.																								.	.	.	.	.
Query Sequence		Q	Q	G	K	E	Y	V	D	F	A	G	G	I	A	V	T	A	L	G	H	C	H	P	A	L	V	N	A	L	K	T	Q	G	E	T	L	W	.	.	.	H	I	S	N	V	F	T	N	E	P	A	L	R	L	G	R	K	L	I	E	A	T	F	.	.	.	.	.	A	E	R	V	V	F	M	N	S	G	T	E
Query Conservation																																							.	.	.																								.	.	.	.	.
Alig confidence														.	.							.																	.	.	.																								.	.	.	.	.
Template Conservation														.	.							.
Template Sequence		A	A	D	P	S	V	V	N	L	G	Q	G	.	.	F	P	D	I	S	P	.	P	S	Y	V	K	E	E	L	S	K	A	A	F	I	D	N	M	N	Q	Y	T	R	G	F	G	H	P	A	L	V	K	A	L	S	C	L	Y	G	K	I	Y	Q	R	Q	I	D	P	N	E	E	I	L	V	A	V	G	A	Y	G
Template Known Secondary structure		T		S	T	T					S	S		.	.				S			.													T	S	G	G	G	G	S				T	T																		T	S				T	T	T	S					S
Template Predicted Secondary structure														.	.							.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.					.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.
Query SS confidence																																																																.	.	.	.
Query Sequence		A	N	E	T	A	F	K	L	A	R	H	Y	A	C	V	R	H	S	P	F	K	T	K	I	I	A	F	H	N	A	F	H	G	R	S	L	F	T	V	S	V	G	G	Q	P	K	Y	S	D	G	F	G	P	K	P	A	D	I	I	H	V	P	.	.	.	.	F	N	D	L	H	A	V	K	A	V	M	D	D	H
Query Conservation																																																																.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.																					.																									.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.																					.
Template Sequence		S	L	F	N	S	I	Q	G	L	.	.	.	.	.	.	.	.	V	D	P	G	D	E	V	I	I	M	V	P	F	Y	D	C	Y	E	P	M	.	V	R	M	A	G	A	V	P	V	F	I	P	L	R	S	K	P	T	D	G	M	K	W	T	S	S	D	W	T	F	D	P	R	E	L	E	S	K	F	S	S	K
Template Known Secondary structure											.	.	.	.	.	.	.	.			T	T								S			T	T					.				T	T															S	S			B	G	G	G														T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.																					.
Template SS confidence
		138	.	140	.	.	.	.	.	.									.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.						240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260
Predicted Secondary structure																																																							.	.	.	.	.																				.
Query SS confidence																																																							.	.	.	.	.																				.
Query Sequence		T	C	A	V	V	V	E	P	I	Q	G	E	G	G	V	T	A	A	T	P	E	F	L	Q	G	L	R	E	L	C	D	Q	H	Q	A	L	L	V	F	D	E	V	Q	C	G	M	G	R	T	G	D	L	F	.	.	.	.	.	A	Y	M	H	Y	G	V	T	P	D	I	L	T	S	A	K	A	L	G	.	G	G
Query Conservation																																																							.	.	.	.	.																				.
Alig confidence																.																																							.	.	.	.	.																				.
Template Conservation																.
Template Sequence		T	K	A	I	I	L	N	T	P	H	N	P	L	G	.	K	V	Y	T	R	Q	E	L	Q	V	I	A	D	L	C	V	K	H	D	T	L	C	I	S	D	E	V	Y	E	W	L	V	Y	T	G	H	T	H	V	K	I	A	T	L	P	G	M	W	E	R	T	I	T	I	G	S	A	G	K	T	F	S	V	T	G
Template Known Secondary structure									S	S		T	T	T		.																			T								T	T	T	T		B		T	T						G	G	G	S	T	T	T	G	G	G											S	S		G	G
Template Predicted Secondary structure																.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.						.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.
Query SS confidence																																												.	.	.	.	.
Query Sequence		F	P	I	S	A	M	L	T	T	A	E	I	A	S	A	F	H	P	G	S	H	G	S	T	Y	G	G	N	P	L	A	C	A	V	A	G	A	A	F	D	I	I	.	.	.	.	.	N	T	P	E	V	L	E	G	I	Q	A	K	R	Q	R	F	V	D	H	L	Q	K	I	D	Q	Q	Y	D	V	F	S	D	I
Query Conservation																																												.	.	.	.	.
Alig confidence																																												.	.	.	.	.
Template Conservation
Template Sequence		W	K	L	G	W	S	I	G	P	A	H	L	I	K	H	L	Q	T	V	Q	Q	N	S	F	Y	T	C	A	T	P	L	Q	A	A	L	A	E	A	F	W	I	D	I	K	R	M	D	D	P	E	C	Y	F	N	S	L	P	K	E	L	E	V	K	R	D	R	M	V	R	L	L	N	S	V	G	L	K	P	I	V
Template Known Secondary structure		G																					T	T	T																				T	T	T	T	S	T	T	S																						T	T	T					B
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
		336	.	.	.	340	.	.	.	.	.	.											.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.												.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	G	M	G	L	L	I	G	A	E	L	.	.	.	.	.	.	.	.	.	.	K	P	Q	Y	K	G	R	A	R	D	F	L	Y	A	G	A	E	A	G	V	M	V	L	N	A	.	.	.	.	.	.	.	.	.	.	.	G	P	D	V	M	R	F	A	P	S	L	V	V	E	D	A	D	I	D	E	G	M	Q
Query Conservation													.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.								.	.
Template Conservation																																																																		.	.
Template Sequence		P	D	G	G	Y	F	I	I	A	D	V	S	S	L	G	A	D	L	S	D	M	N	S	D	E	P	Y	D	Y	K	F	V	K	W	M	T	K	H	K	K	L	T	A	I	P	V	S	A	F	C	D	S	K	S	K	P	H	F	E	K	L	V	R	F	.	.	C	F	I	K	K	D	S	T	L	D	A	A	E	E
Template Known Secondary structure			S	B	S	S							T	T	S					T	T	T				S															S						G	G	G	G	S		T	T	T					T	T					.	.
Template Predicted Secondary structure																																																																		.	.
Template SS confidence
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.			.	.	.	.	.	.	.	.	440	.	.	.	.	.
		395	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	A	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	F	R	A
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		446	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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