Job Description P18335 Confidence 99.95% Date Thu Jan 5 11:36:49 GMT 2012 Rank 130 Aligned Residues 345 % Identity 13% Template c3dydB_ PDB info PDB header:transferase Chain: B: PDB Molecule:tyrosine aminotransferase; PDBTitle: human tyrosine aminotransferase Resolution 2.30 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.				.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.				.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																				.																	.	.	.																							.	.	.
Query SS confidence																				.																	.	.	.																							.	.	.
Query Sequence		G	K	E	Y	V	D	F	A	G	G	I	A	V	T	A	L	G	H	.	C	H	P	A	L	V	N	A	L	K	T	Q	G	E	T	L	.	.	.	W	H	I	S	N	V	F	T	N	E	P	A	L	R	L	G	R	K	L	I	E	A	.	.	.	T	F	A	E	R	V	V	F	M	N	S	G	T	E	A	N	E
Query Conservation																				.																	.	.	.																							.	.	.
Alig confidence																				.																	.	.	.																							.	.	.
Template Conservation
Template Sequence		N	K	T	M	I	S	L	S	I	G	D	P	T	V	F	G	N	L	P	T	D	P	E	V	T	Q	A	M	K	D	A	L	D	S	G	K	Y	N	G	Y	A	P	S	I	G	F	L	S	S	R	E	E	I	A	S	Y	Y	H	C	P	E	A	P	L	E	A	K	D	V	I	L	T	S	G	C	S	Q	A	I	D
Template Known Secondary structure		T	S					S					T	T	T	T	S	S	S																	T		S	S	S				T	T															B	T	T	B				G	G	G					S
Template Predicted Secondary structure
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	F	K	L	A	R	H	Y	A	C	V	R	H	S	P	F	K	T	K	I	I	A	F	H	N	A	F	H	G	R	S	L	F	T	V	S	V	G	G	Q	P	K	Y	S	D	G	F	G	P	K	P	A	D	I	I	H	V	P	F	N	D	L	H	A	V	K	A	V	M	D	D	H	T	C	A	V	V	V	E
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Template Sequence		L	C	L	A	V	L	.	.	.	.	.	.	.	.	A	N	P	G	Q	N	I	L	V	P	R	P	G	F	S	L	Y	K	T	L	A	E	S	M	.	.	.	.	.	.	G	I	E	V	K	L	Y	N	L	L	P	E	K	S	W	E	I	D	L	K	Q	L	E	Y	L	I	D	E	K	T	A	C	L	I	V	N
Template Known Secondary structure								.	.	.	.	.	.	.	.			T	T								S			T									T	.	.	.	.	.	.	T										G	G	G	T	T													T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Template SS confidence
		150	.	.	.	.	.									.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.							180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.					240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.																				.
Query SS confidence																																																.	.	.	.																				.
Query Sequence		P	I	Q	G	E	G	G	V	T	A	A	T	P	E	F	L	Q	G	L	R	E	L	C	D	Q	H	Q	A	L	L	V	F	D	E	V	Q	C	G	M	G	R	T	G	D	L	F	.	.	.	.	A	Y	M	H	Y	G	V	T	P	D	I	L	T	S	A	K	A	L	G	.	G	G	F	P	I	S	A	M	L	T
Query Conservation																																																.	.	.	.																				.
Alig confidence									.																																							.	.	.	.																				.
Template Conservation									.
Template Sequence		N	P	S	N	P	C	G	.	S	V	F	S	K	R	H	L	Q	K	I	L	A	V	A	A	R	Q	C	V	P	I	L	A	D	E	I	Y	G	D	M	V	F	S	D	C	K	Y	E	P	L	A	T	L	S	T	D	V	P	I	L	S	C	G	G	L	A	K	R	W	L	V	P	G	W	R	L	G	W	I	L	I
Template Known Secondary structure		S	S		T	T	T		.																			T								T	T	T	T		B		S	S	S					G	G	G	G		S	S									S	T	T	T	T	T		G	G	G
Template Predicted Secondary structure									.
Template SS confidence
		216	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.						.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure																	.	.	.	.	.
Query SS confidence																	.	.	.	.	.
Query Sequence		T	A	E	I	A	S	A	F	H	P	G	S	H	G	S	.	.	.	.	.	T	Y	G	G	N	P	L	A	C	A	V	A	G	A	A	F	D	I	I	N	T	P	E	V	L	E	G	I	Q	A	K	R	Q	R	F	V	D	H	L	Q	K	I	D	Q	Q	Y	D	V	F	S	D	I	R	G	M	G	L	L	I	G
Query Conservation																	.	.	.	.	.
Alig confidence																	.	.	.	.	.
Template Conservation
Template Sequence		H	D	R	R	D	I	F	G	N	E	I	R	D	G	L	V	K	L	S	Q	R	I	L	G	P	C	T	I	V	Q	G	A	L	K	S	I	L	C	R	T	P	G	E	F	Y	H	N	T	L	S	F	L	K	S	N	A	D	L	C	Y	G	A	L	A	A	I	P	G	L	R	P	V	R	P	S	G	A	M	Y	L
Template Known Secondary structure					T	T	S	S																		S															S																									T	S	T	T								B	T	T
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
		344	.	.	.						.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.					.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure						.	.	.	.	.																									.	.	.	.
Query SS confidence						.	.	.	.	.																									.	.	.	.
Query Sequence		A	E	L	K	.	.	.	.	.	P	Q	Y	K	G	R	A	R	D	F	L	Y	A	G	A	E	A	G	V	M	V	L	N	A	.	.	.	.	G	P	D	V	M	R	F	A	P	S	L	V	V	E	D	A	D	I	D	E	G	M	Q	R	F	A	H	A	V	A	K
Query Conservation						.	.	.	.	.																									.	.	.	.
Alig confidence						.	.	.	.	.																									.	.	.	.								.	.
Template Conservation																																														.	.
Template Sequence		M	V	G	I	E	M	E	H	F	P	E	F	E	N	D	V	E	F	T	E	R	L	V	A	E	Q	S	V	H	C	L	P	A	T	C	F	E	Y	P	N	F	I	R	V	.	.	V	I	T	V	P	E	V	M	M	L	E	A	C	S	R	I	Q	E	F	C	E	Q
Template Known Secondary structure							G	G	G		T	T		S	S																			G	G	G	G	T		T	T					.	.		S		S
Template Predicted Secondary structure																																														.	.
Template SS confidence
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.			.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions