Job Description P18335 Confidence 99.95% Date Thu Jan 5 11:36:49 GMT 2012 Rank 116 Aligned Residues 348 % Identity 14% Template c3cbfA_ PDB info PDB header:transferase Chain: A: PDB Molecule:alpha-aminodipate aminotransferase; PDBTitle: crystal structure of lysn, alpha-aminoadipate2 aminotransferase, from thermus thermophilus hb27 Resolution 1.67 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																																																.														.	.
Query SS confidence																																																.														.	.
Query Sequence		Q	G	K	E	Y	V	D	F	A	G	G	I	A	V	T	A	L	G	H	C	H	P	A	L	V	N	A	L	K	T	Q	G	E	T	L	W	H	I	S	N	V	F	T	N	E	P	.	A	L	R	L	G	R	K	L	I	E	A	T	F	.	.	A	E	R	V	V	F	M	N	S	G	T	E	A	N	E	T	A	F
Query Conservation																																																.														.	.
Alig confidence																			.																													.														.	.
Template Conservation																			.
Template Sequence		Q	R	P	G	I	L	S	F	A	G	G	L	P	A	P	E	L	.	F	P	K	E	E	A	A	E	A	A	A	R	I	L	R	E	K	G	E	V	A	L	Q	Y	S	P	T	E	G	Y	A	P	L	R	A	F	V	A	E	W	I	G	V	R	P	E	E	V	L	I	T	T	G	S	Q	Q	A	L	D	L	V	G
Template Known Secondary structure		T	S	T	T					S	S					G	G	G	.	S																					T	S				T	T														T	S		G	G	G					S	S
Template Predicted Secondary structure																			.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	A	R	H	Y	A	C	V	R	H	S	P	F	K	T	K	I	I	A	F	H	N	A	F	H	G	R	S	L	F	T	V	S	V	G	G	Q	P	K	Y	S	D	G	F	G	P	K	P	A	D	I	I	H	V	P	F	N	D	L	H	A	V	K	A	V	M	D	D	H	T	C	A	V	V	V	E	P	I	Q
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.																									.	.	.	.	.	.																										.
Template Conservation					.	.	.	.	.	.	.	.																									.	.	.	.	.	.																										.
Template Sequence		K	V	F	.	.	.	.	.	.	.	.	L	D	E	G	S	P	V	L	L	E	A	P	S	Y	M	G	A	I	Q	A	F	R	L	Q	.	.	.	.	.	.	G	P	R	F	L	T	V	P	A	G	E	E	G	P	D	L	D	A	L	E	E	V	L	K	R	.	E	R	P	R	F	L	Y	L	I	P	S	F	Q
Template Known Secondary structure					.	.	.	.	.	.	.	.			T	T								S											T	T	.	.	.	.	.	.											T	T														.				S							B	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.																									.	.	.	.	.	.																										.
Template SS confidence
		109	110	.									.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.							.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240								.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.
Query Sequence		G	E	G	G	V	T	A	A	T	P	E	F	L	Q	G	L	R	E	L	C	D	Q	H	Q	A	L	L	V	F	D	E	V	Q	C	G	M	G	R	T	G	D	L	F	A	.	.	.	.	.	.	.	Y	M	H	Y	G	V	T	P	D	I	L	T	S	A	K	A	L	G	G	G	F	P	I	S	A	M	L	T	T
Query Conservation																																														.	.	.	.	.	.	.
Alig confidence						.																																								.	.	.	.	.	.	.
Template Conservation						.
Template Sequence		N	P	T	G	.	G	L	T	P	L	P	A	R	K	R	L	L	Q	M	V	M	E	R	G	L	V	V	V	E	D	D	A	Y	R	E	L	Y	F	G	E	A	R	L	P	S	L	F	E	L	A	R	E	A	G	Y	P	G	V	I	Y	L	G	S	F	S	K	V	L	S	P	G	L	R	V	A	F	A	V	A	H
Template Known Secondary structure		T	T	T		.		B																	T								T	T	T	T		B		S	S														T										S	T	T	T	T		S	T	T
Template Predicted Secondary structure						.
Template SS confidence
		174	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	I	A	S	A	F	H	P	G	S	H	G	S	T	Y	G	G	N	P	L	A	C	A	V	A	G	A	A	F	D	I	I	N	T	P	E	V	L	E	G	I	Q	A	K	R	Q	R	F	V	D	H	L	Q	K	I	D	Q	Q	Y	D	V	F	S	D	I	R	G	M	G	L	L	I	G	A	E	L	K	P	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	E	A	L	Q	K	L	V	Q	A	K	Q	G	A	D	L	H	T	P	M	L	N	Q	M	L	V	H	E	L	L	K	E	G	F	S	E	R	L	E	R	V	R	R	V	Y	R	E	K	A	Q	A	M	L	H	A	L	D	R	E	V	P	K	E	V	R	Y	T	R	P	K	G	G	M	F	V	W	M	E	L	P
Template Known Secondary structure																	S	S														T	T	T																											S		T	T	S						S	B	S	S
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370									.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.
Query Sequence		Y	K	G	R	A	R	D	F	L	Y	A	G	A	E	A	G	V	M	V	L	N	.	.	.	.	.	.	.	.	A	G	P	D	V	M	R	F	A	P	S	L	V	V	E	D	A	D	I	D	E	G	M	Q	R	F	A	H	A	V	A	K	V	V	G
Query Conservation																							.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.												.
Template Conservation																																										.
Template Sequence		K	G	L	S	A	E	G	L	F	R	R	A	L	E	E	N	V	A	F	V	P	G	G	P	F	F	A	N	G	G	G	E	N	T	L	R	L	S	Y	A	.	T	L	D	R	E	G	I	A	E	G	V	R	R	L	G	R	A	L	K	G	L	L	A
Template Known Secondary structure		T	T													T	T						S	G	G	G		T	T	S			T	T							S	.	S	S
Template Predicted Secondary structure																																										.
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.		.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions