Job Description P18335 Confidence 100.00% Date Thu Jan 5 11:36:49 GMT 2012 Rank 17 Aligned Residues 377 % Identity 30% Template c3bv0A_ PDB info PDB header:transferase Chain: A: PDB Molecule:adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PDBTitle: crystal structure of plp bound 7,8-diaminopelargonic acid synthase in2 mycobacterium tuberculosis Resolution 2.21 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.				.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																				.	.	.																																									.
Query SS confidence																				.	.	.																																									.
Query Sequence		I	Y	A	P	A	E	F	I	P	V	K	G	Q	G	S	R	I	W	.	.	.	D	Q	Q	G	K	E	Y	V	D	F	A	G	G	I	A	V	T	A	L	G	H	C	H	P	A	L	V	N	A	L	K	T	Q	G	E	T	L	W	H	I	.	S	N	V	F	T	N	E	P	A	L	R	L	G	R	K	L	I	E
Query Conservation																				.	.	.																																									.
Alig confidence																				.	.	.																																									.
Template Conservation
Template Sequence		L	W	H	P	S	P	V	V	A	V	A	A	H	G	A	W	L	T	L	I	R	D	G	Q	P	I	E	V	L	D	A	M	S	S	W	W	T	A	I	H	G	H	G	H	P	A	L	D	Q	A	L	T	T	Q	L	R	V	M	N	H	V	M	F	G	G	L	T	H	E	P	A	A	R	L	A	K	L	L	V	D
Template Known Secondary structure															B	T							T	T								T	T					T		T	T		B	T																S				S	S	S
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		96	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure				.	.																																																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.																																																																			.	.	.	.	.	.	.	.	.	.
Query Sequence		A	T	.	.	F	A	E	R	V	V	F	M	N	S	G	T	E	A	N	E	T	A	F	K	L	A	R	H	Y	A	C	V	R	H	S	P	F	K	T	K	I	I	A	F	H	N	A	F	H	G	R	S	L	F	T	V	S	V	G	G	Q	P	K	Y	S	D	G	F	G	P	.	.	.	.	.	.	.	.	.	.
Query Conservation				.	.																																																																			.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.																																																																			.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	T	P	A	G	L	D	T	V	F	F	S	D	S	G	S	V	S	V	E	V	A	A	K	M	A	L	Q	Y	W	R	G	R	G	L	P	G	K	R	R	L	M	T	W	R	G	G	Y	H	G	D	T	F	L	A	M	S	I	C	D	P	H	G	G	M	H	S	L	W	T	D	V	L	A	A	Q	V	F	A	P
Template Known Secondary structure			S	S	T	T								S	S																		T	T	T		T	T								T	T					S	S					T	T	S		T	T	T	T	T	G	G	G	G	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
			164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure		.																																.
Query SS confidence		.																																.
Query Sequence		.	K	P	A	D	I	I	H	V	P	F	N	D	L	H	A	V	K	A	V	M	D	D	H	T	C	A	V	V	V	E	P	.	I	Q	G	E	G	G	V	T	A	A	T	P	E	F	L	Q	G	L	R	E	L	C	D	Q	H	Q	A	L	L	V	F	D	E	V	Q	C	G	M	G	R	T	G	D	L	F	A	Y
Query Conservation		.																																.
Alig confidence		.																																.
Template Conservation
Template Sequence		Q	V	P	R	D	Y	D	P	A	Y	S	A	A	F	E	A	Q	L	A	Q	H	A	G	E	L	A	A	V	V	V	E	P	V	V	Q	G	A	G	G	M	R	F	H	D	P	R	Y	L	H	D	L	R	D	I	C	R	R	Y	E	V	L	L	I	F	D	E	I	A	T	G	F	G	R	T	G	A	L	F	A	A
Template Known Secondary structure					S	S																	G	G	G								S	S				T	T	T						T														T								T	T	T	T	T	T	T	T	S	S	S	S	G	G
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		M	H	Y	G	V	T	P	D	I	L	T	S	A	K	A	L	G	G	G	F	.	P	I	S	A	M	L	T	T	A	E	I	A	S	A	F	H	P	G	S	H	G	S	T	Y	G	G	N	P	L	A	C	A	V	A	G	A	A	F	D	I	I	N	T	P	E	V	L	E	G	I	Q	A	K	R	Q	R	F	V	D
Query Conservation																						.
Alig confidence																						.																	.	.	.
Template Conservation																																							.	.	.
Template Sequence		D	H	A	G	V	S	P	D	I	M	C	V	G	K	A	L	T	G	G	Y	L	S	L	A	A	T	L	C	T	A	D	V	A	H	T	I	S	.	.	.	A	G	P	T	F	M	A	N	P	L	A	C	A	V	S	V	A	S	V	E	L	L	L	G	Q	D	W	R	T	R	I	T	E	L	A	A	G	L	T	A
Template Known Secondary structure		G	G	T	T				S						G	G	G	G	T	T	S	S																	.	.	.				T	T	T	T																	T	T	T
Template Predicted Secondary structure																																							.	.	.
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.				.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	Q	K	I	D	Q	Q	Y	D	V	F	S	D	I	R	G	M	G	L	L	I	G	A	E	L	K	P	Q	Y	K	G	R	A	R	D	F	L	Y	A	G	A	E	A	G	V	M	V	L	N	A	G	P	D	V	M	R	F	A	P	S	L	V	V	E	D	A	D	I	D	E	G	M	Q	R	F	A	H	A	V
Query Conservation
Alig confidence							.																					.	.																									.
Template Conservation							.																					.	.																									.
Template Sequence		G	L	D	T	A	.	R	A	L	P	A	V	T	D	V	R	V	C	G	A	I	G	V	I	E	C	.	.	D	R	P	V	D	L	A	V	A	T	P	A	A	L	D	R	G	V	W	L	R	P	F	R	.	N	L	V	Y	A	M	P	P	Y	I	C	T	P	A	E	I	T	Q	I	T	S	A	M	V	E	V	A
Template Known Secondary structure				G	G	G	.	G	G		T	T								T	T							.	.	S	S													T	T	T						B	T	.	T								T	T
Template Predicted Secondary structure							.																					.	.																									.
Template SS confidence
		355	.	.	.	.		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.			380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.		.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
		401	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	V
Template Known Secondary structure			T
Template Predicted Secondary structure
Template SS confidence
		431	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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