Job Description P18335 Confidence 100.00% Date Thu Jan 5 11:36:49 GMT 2012 Rank 10 Aligned Residues 391 % Identity 29% Template c3a8uX_ PDB info PDB header:transferase Chain: X: PDB Molecule:omega-amino acid--pyruvate aminotransferase; PDBTitle: crystal structure of omega-amino acid:pyruvate aminotransferase Resolution 1.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		12	.	.	.	.	.	.	.	20						.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.																																																											.
Query SS confidence											.	.	.	.	.																																																											.
Query Sequence		T	F	D	E	V	I	L	P	I	.	.	.	.	.	Y	A	P	A	E	F	I	P	V	K	G	Q	G	S	R	I	W	D	Q	Q	G	K	E	Y	V	D	F	A	G	G	I	A	V	T	A	L	G	H	C	H	P	A	L	V	N	A	L	K	T	Q	G	E	T	L	W	H	I	S	.	N	V	F	T	N	E	P
Query Conservation											.	.	.	.	.																																																											.
Alig confidence											.	.	.	.	.																																																											.
Template Conservation
Template Sequence		K	L	D	A	H	W	M	P	Y	T	A	N	R	N	F	L	R	D	P	R	L	I	V	A	A	E	G	S	W	L	V	D	D	K	G	R	K	V	Y	D	S	L	S	G	L	W	T	C	G	A	G	H	T	R	K	E	I	Q	E	A	V	A	K	Q	L	S	T	L	D	Y	S	P	G	F	Q	Y	G	H	P	L
Template Known Secondary structure			G	G	G	S			T	T	S								S									B	T					T	T							T	T					T		T	T		B	S												T	T	T		S				S	S	S
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		A	L	R	L	G	R	K	L	I	E	A	T	.	.	F	A	E	R	V	V	F	M	N	S	G	T	E	A	N	E	T	A	F	K	L	A	R	H	Y	A	C	V	R	H	S	P	F	K	T	K	I	I	A	F	H	N	A	F	H	G	R	S	L	F	T	V	S	V	G	G	Q	P	K	Y	S	D	G	F	G	P
Query Conservation														.	.
Alig confidence														.	.
Template Conservation
Template Sequence		S	F	Q	L	A	E	K	I	T	D	L	T	P	G	N	L	N	H	V	F	F	T	D	S	G	S	E	C	A	L	T	A	V	K	M	V	R	A	Y	W	R	L	K	G	Q	A	T	K	T	K	M	I	G	R	A	R	G	Y	H	G	V	N	I	A	G	T	S	L	G	G	V	N	G	N	R	K	L	F	G	Q
Template Known Secondary structure											T	T	S	S	T	T								S	S																			T	T		T	T								T	T					S	S														T	T	T
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.																			.	.	.	180	.	.	.	.					.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.
Query Sequence		K	P	A	D	I	I	H	V	P	F	N	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	A	V	K	A	V	M	D	.	.	.	.	D	H	T	C	A	V	V	V	E	P	I	Q	G	E	G	G	V	T	A	A	T	P	E	F	L	Q	G	L	R	E	L	C	D	Q	H	Q	A
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.
Template Conservation
Template Sequence		P	M	Q	D	V	D	H	L	P	H	T	L	L	A	S	N	A	Y	S	R	G	M	P	K	E	G	G	I	A	L	A	D	E	L	L	K	L	I	E	L	H	D	A	S	N	I	A	A	V	F	V	E	P	L	A	G	S	A	G	V	L	V	P	P	E	G	Y	L	K	R	N	R	E	I	C	N	Q	H	N	I
Template Known Secondary structure			S		S										G	G	G	T	T		S	S	S		S	S	S																	G	G	G								S	S	B	T	T	T	T		B				T	T													T
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.										280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																																										.																			.	.	.	.	.	.	.	.	.
Query SS confidence																																										.																			.	.	.	.	.	.	.	.	.
Query Sequence		L	L	V	F	D	E	V	Q	C	G	M	G	R	T	G	D	L	F	A	Y	M	H	Y	G	V	T	P	D	I	L	T	S	A	K	A	L	G	G	G	F	.	P	I	S	A	M	L	T	T	A	E	I	A	S	A	F	H	P	G	.	.	.	.	.	.	.	.	.	S	H	G	S	T	Y	G	G	N	P	L	A
Query Conservation																																										.																			.	.	.	.	.	.	.	.	.
Alig confidence																																										.																			.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	V	F	D	E	V	I	T	G	F	G	R	T	G	S	M	F	G	A	D	S	F	G	V	T	P	D	L	M	C	I	A	K	Q	V	T	N	G	A	I	P	M	G	A	V	I	A	S	T	E	I	Y	Q	T	F	M	N	Q	P	T	P	E	Y	A	V	E	F	P	H	G	Y	T	Y	S	A	H	P	V	A
Template Known Secondary structure								T	T	T	T	T	T	T	T	S	S	S	S						T				S						G	G	G	G	T	T	S	S																	T		S	S		T	T	S		S	S					T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.				.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.
Query SS confidence																																																											.	.	.
Query Sequence		C	A	V	A	G	A	A	F	D	I	I	N	T	P	E	V	L	E	G	I	Q	A	K	R	Q	R	F	V	D	H	L	Q	K	I	D	Q	Q	Y	D	V	F	S	D	I	R	G	M	G	L	L	I	G	A	E	L	K	P	.	.	.	Q	Y	K	G	R	A	R	D	F	L	Y	A	G	A	E	A	G	V	M	V
Query Conservation																																																											.	.	.
Alig confidence																																			.																								.	.	.
Template Conservation																																			.
Template Sequence		C	A	A	G	L	A	A	L	C	L	L	Q	K	E	N	L	V	Q	S	V	A	E	V	A	P	H	F	E	K	A	L	H	G	.	I	K	G	A	K	N	V	I	D	I	R	N	F	G	L	A	G	A	I	Q	I	A	P	R	D	G	D	A	I	V	R	P	F	E	A	G	M	A	L	W	K	A	G	F	Y	V
Template Known Secondary structure															T	T																		T	.	T	T	T	S	T	T								T	T									B	T	T	B	S	S														T
Template Predicted Secondary structure																																			.
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.		.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	A	G	P	D	V	M	R	F	A	P	S	L	V	V	E	D	A	D	I	D	E	G	M	Q	R	F	A	H	A	V	A	K	V	V
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		R	F	G	G	.	D	T	L	Q	F	G	P	T	F	N	S	K	P	Q	D	L	D	R	L	F	D	A	V	G	E	V	L	N	K	L	L
Template Known Secondary structure					T	.	T								T	T
Template Predicted Secondary structure						.
Template SS confidence
		414	.	.	.		.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.