Job Description P18335 Confidence 99.93% Date Thu Jan 5 11:36:49 GMT 2012 Rank 159 Aligned Residues 316 % Identity 16% Template c2po3B_ PDB info PDB header:transferase Chain: B: PDB Molecule:4-dehydrase; PDBTitle: crystal structure analysis of desi in the presence of its2 tdp-sugar product Resolution 2.10 Å

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	L	V	N	A	L	K	T	Q	G	E	T	L	W	H	I	S	N	V	F	T	N	E	P	A	L	R	L	G	R	K	L	I	E	A	T	F	A	E	R	V	V	F	M	N	S	G	T	E	A	N	E	T	A	F	K	L	A	R	H	Y	A	C	V	R	H	S	P	F	K	T	K	I	I	A	F	H	N	A
Query Conservation
Alig confidence																					.	.	.																																							.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.																																							.	.	.	.	.	.	.	.	.
Template Sequence		A	R	L	Y	E	R	L	D	R	A	L	D	S	Q	W	L	S	N	G	.	.	.	G	P	L	V	R	E	F	E	E	R	V	A	G	L	A	G	V	R	H	A	V	A	T	C	N	A	T	A	G	L	Q	L	L	A	H	A	A	G	.	.	.	.	.	.	.	.	.	L	T	G	E	V	I	M	P	S	M	T
Template Known Secondary structure															T			S	S	S	.	.	.																T	S	S						S														T	.	.	.	.	.	.	.	.	.			S						S	S	S
Template Predicted Secondary structure																					.	.	.																																							.	.	.	.	.	.	.	.	.
Template SS confidence
		2032	.	.	.	.	.	.	.	2040	.	.	.	.	.	.	.	.	.	2050				.	.	.	.	.	.	.	.	.	2060	.	.	.	.	.	.	.	.	.	2070	.	.	.	.	.	.	.	.	.	2080	.	.	.	.	.	.	.	.										.	2090	.	.	.	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		F	H	G	R	S	L	F	T	V	S	V	G	G	Q	P	K	Y	S	D	G	F	G	P	K	P	A	D	I	I	H	V	P	F	N	D	L	H	A	V	K	A	V	M	D	D	H	T	C	A	V	V	V	E	P	I	Q	G	E	G	G	V	T	A	A	T	P	E	F	L	Q	G	L	R	E	L	C	D	Q	H	Q
Query Conservation
Alig confidence																						.	.	.	.	.	.	.																									.	.	.											.	.	.	.
Template Conservation																						.	.	.	.	.	.	.																									.	.	.											.	.	.	.
Template Sequence		F	A	A	T	P	H	A	L	R	W	I	G	L	T	P	V	F	A	D	I	.	.	.	.	.	.	.	D	P	D	T	G	N	L	D	P	D	Q	V	A	A	A	V	T	P	R	T	S	A	V	V	.	.	.	G	V	H	L	W	G	R	P	C	A	.	.	.	.	A	D	Q	L	R	K	V	A	D	E	H	G
Template Known Secondary structure			T									T	T								B	.	.	.	.	.	.	.		T	T	T	S	S	B		S	T	T							T	T						.	.	.				G	G	G					.	.	.	.												T
Template Predicted Secondary structure																						.	.	.	.	.	.	.																									.	.	.											.	.	.	.
Template SS confidence
		2100	.	.	.	.	.	.	.	.	.	2110	.	.	.	.	.	.	.	.	.								2120	.	.	.	.	.	.	.	.	.	2130	.	.	.	.	.	.	.	.	.	2140	.	.	.				.	.	.	.	.	.	2150	.	.	.					.	.	.	.	.	.	2160	.	.	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280											.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	L	V	F	D	E	V	Q	C	G	M	G	R	T	G	D	L	F	A	Y	M	H	Y	G	V	T	P	D	I	L	T	S	A	K	A	L	G	G	G	F	P	I	S	A	M	L	T	T	A	E	I	A	S	A	F	H	P	G	S	.	.	.	.	.	.	.	.	.	.	H	G	S	T	Y	G	G	N	P	L
Query Conservation																																																														.	.	.	.	.	.	.	.	.	.
Alig confidence																																																														.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	L	Y	F	D	A	A	H	A	L	G	C	A	V	D	G	R	P	A	G	S	L	G	D	A	E	V	F	S	F	H	A	T	K	A	V	N	A	F	E	G	G	A	V	V	T	D	D	A	D	L	A	A	R	I	R	A	L	H	N	F	G	F	D	L	P	G	G	S	P	A	G	G	T	N	A	K	M	S
Template Known Secondary structure									T	T		T	T				T	T			T	T	S	S	S	S	S							T	T	S	S	S			S	S							S												T	B	T	T	T	T		T	T			T	T				B		B
Template Predicted Secondary structure
Template SS confidence
		2166	.	.	.	2170	.	.	.	.	.	.	.	.	.	2180	.	.	.	.	.	.	.	.	.	2190	.	.	.	.	.	.	.	.	.	2200	.	.	.	.	.	.	.	.	.	2210	.	.	.	.	.	.	.	.	.	2220	.	.	.	.	.	.	.	.	.	2230	.	.	.	.	.	.	.	.	.	2240	.	.	.	.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.				.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.
Query SS confidence																																																																.	.	.
Query Sequence		A	C	A	V	A	G	A	A	F	D	I	I	N	T	P	E	V	L	E	G	I	Q	A	K	R	Q	R	F	V	D	H	L	Q	K	I	D	Q	Q	Y	D	V	F	S	D	I	R	G	M	G	L	L	I	G	A	E	L	K	P	Q	Y	K	G	.	.	.	R	A	R	D	F	L	Y	A	G	A	E	A	G	V	M
Query Conservation																																																																.	.	.
Alig confidence																																																																.	.	.
Template Conservation
Template Sequence		E	A	A	A	A	M	G	L	T	S	L	D	A	F	P	E	V	I	D	R	N	R	R	N	H	A	A	Y	R	E	H	L	A	D	L	P	G	V	L	V	A	D	H	D	R	H	G	L	N	N	H	Q	Y	V	I	V	E	I	D	E	A	T	T	G	I	H	R	D	L	V	M	E	V	L	K	A	E	G	V	H
Template Known Secondary structure																																	T		S		T	T						G	G	G	G	S	B																S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		2246	.	.	.	2250	.	.	.	.	.	.	.	.	.	2260	.	.	.	.	.	.	.	.	.	2270	.	.	.	.	.	.	.	.	.	2280	.	.	.	.	.	.	.	.	.	2290	.	.	.	.	.	.	.	.	.	2300	.	.	.	.	.	.	.	.	.	2310	.	.	.	.	.	.	.	.	.	2320	.	.	.	.	.
		368	.	370	.																										.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	D	V	M	R	F	A	P	S	L	V	V	E	D	A	D	I	D	E	G	M	Q	R	F	A	H	A	V	A	K
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	R	A	Y	F	S	P	G	C	H	E	L	E	P	Y	R	G	Q	P	H	A	P	L	P	H	T	E	R	L	A	A	R	V	L	S	L	P	T	G	T	A	I	G	D	D	D	I	R	R	V	A	D	L	L	R	L	C	A	T	R
Template Known Secondary structure			B		T	T		S		G	G	G	S	T	T	T	T	T	S													T	T							S	T	T																			S
Template Predicted Secondary structure
Template SS confidence
		2326	.	.	.	2330	.	.	.	.	.	.	.	.	.	2340	.	.	.	.	.	.	.	.	.	2350	.	.	.	.	.	.	.	.	.	2360	.	.	.	.	.	.	.	.	.	2370	.	.	.	.	.	.	.	.	.	2380	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions