Job Description P18335 Confidence 99.96% Date Thu Jan 5 11:36:49 GMT 2012 Rank 99 Aligned Residues 338 % Identity 12% Template c2o1bA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase, class i; PDBTitle: structure of aminotransferase from staphylococcus aureus Resolution 1.95 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.				.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.						.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																																				.	.	.																										.	.	.	.	.
Query SS confidence																																				.	.	.																										.	.	.	.	.
Query Sequence		Q	G	K	E	Y	V	D	F	A	G	G	I	A	V	T	A	L	G	H	C	H	P	A	L	V	N	A	L	K	T	Q	G	E	T	.	.	.	L	W	H	I	S	N	V	F	T	N	E	P	A	L	R	L	G	R	K	L	I	E	A	T	F	.	.	.	.	.	A	E	R	V	V	F	M	N	S	G	T	E	A
Query Conservation																																				.	.	.																										.	.	.	.	.
Alig confidence													.	.							.															.	.	.																										.	.	.	.	.
Template Conservation													.	.							.
Template Sequence		G	P	L	P	L	I	N	X	A	V	G	.	.	I	P	D	G	P	T	.	P	Q	G	I	I	D	H	F	Q	K	A	L	T	I	P	E	N	Q	K	Y	G	A	F	H	G	K	E	A	F	K	Q	A	I	V	D	F	Y	Q	R	Q	Y	N	V	T	L	D	K	E	D	E	V	C	I	L	Y	G	T	K	N	G
Template Known Secondary structure			S	S									.	.	S		S	S			.												T	T						S				T	T																							T	T	T	S					S	S
Template Predicted Secondary structure													.	.							.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	T	A	F	K	L	A	R	H	Y	A	C	V	R	H	S	P	F	K	T	K	I	I	A	F	H	N	A	F	H	G	R	S	L	F	T	V	S	V	G	G	Q	P	K	Y	S	D	G	F	G	P	K	P	A	D	I	I	H	V	P	F	N	D	L	H	A	V	K	A	V	M	D	D	H	T	C	A	V	V
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.
Template Sequence		L	V	A	V	P	T	C	V	.	.	.	.	.	.	.	.	I	N	P	G	D	Y	V	L	L	P	D	P	G	Y	T	D	Y	L	A	G	V	L	L	A	D	G	K	P	V	P	L	N	L	.	.	.	.	.	.	.	E	P	P	H	Y	L	P	D	W	S	K	V	D	S	Q	I	I	D	K	T	K	L	I	Y
Template Known Secondary structure										.	.	.	.	.	.	.	.			T	T								S			S	S								T	T									.	.	.	.	.	.	.		T	T	T					G	G	G	S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.									110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.								.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.					240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.																				.
Query SS confidence																																																		.	.	.	.																				.
Query Sequence		V	E	P	I	Q	G	E	G	G	V	T	A	A	T	P	E	F	L	Q	G	L	R	E	L	C	D	Q	H	Q	A	L	L	V	F	D	E	V	Q	C	G	M	G	R	T	G	D	L	F	.	.	.	.	A	Y	M	H	Y	G	V	T	P	D	I	L	T	S	A	K	A	L	G	.	G	G	F	P	I	S	A	M
Query Conservation																																																		.	.	.	.																				.
Alig confidence											.																																							.	.	.	.																				.
Template Conservation											.
Template Sequence		L	T	Y	P	N	N	P	T	G	.	S	T	A	T	K	E	V	F	D	E	A	I	A	K	F	K	G	T	D	T	K	I	V	H	D	F	A	Y	G	A	F	G	F	D	A	K	N	P	S	I	L	A	S	E	N	G	K	D	V	A	I	E	I	Y	S	L	S	K	G	Y	N	X	S	G	F	R	V	G	F	A
Template Known Secondary structure				S	S		T	T	T		.																T	T	S	S								T	T	T	T		B	S	S	S					G	G	G	S	T	T											S	T	T	T	T	T		G	G	G
Template Predicted Secondary structure											.
Template SS confidence
		167	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	T	A	E	I	A	S	A	F	H	P	G	S	H	G	S	T	Y	G	G	N	P	L	A	C	A	V	A	G	A	A	F	D	I	I	N	T	P	E	V	L	E	G	I	Q	A	K	R	Q	R	F	V	D	H	L	Q	K	I	D	Q	Q	Y	D	V	F	S	D	I	R	G	M	G	L	L	I	G	A	E	L
Query Conservation
Alig confidence																																				.	.
Template Conservation																																				.	.
Template Sequence		V	G	N	K	D	X	I	Q	A	L	K	K	Y	Q	T	H	T	N	A	G	X	F	G	A	L	Q	D	A	A	I	Y	A	L	N	.	.	H	Y	D	D	F	L	E	E	Q	S	N	V	F	K	T	R	R	D	R	F	E	A	X	L	A	K	A	D	L	P	F	V	H	A	K	G	G	I	Y	V	W	L	E	T
Template Known Secondary structure																																				.	.																											T	T								B	S	S
Template Predicted Secondary structure																																				.	.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.			280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.		.	.	.	.	.	370	.							.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure																				.								.	.	.	.	.	.
Query SS confidence																				.								.	.	.	.	.	.
Query Sequence		K	P	Q	Y	K	G	R	A	R	D	F	L	Y	A	G	A	E	A	.	G	V	M	V	L	N	A	.	.	.	.	.	.	G	P	D	V	M	R	F	A	P	S	L	V	V	E	D	A	D	I	D	E	G	M	Q	R	F	A	H	A	V	A	K
Query Conservation																				.								.	.	.	.	.	.
Alig confidence		.	.																	.								.	.	.	.	.	.								.	.
Template Conservation		.	.																																						.	.
Template Sequence		.	.	P	P	G	Y	D	S	E	Q	F	E	Q	F	L	V	Q	E	K	S	I	L	V	A	P	G	K	P	F	G	E	N	G	N	R	Y	V	R	I	.	.	S	L	A	L	D	D	Q	K	L	D	E	A	A	I	R	L	T	E	L	A	Y	L
Template Known Secondary structure		.	.		T	T																					S	G	G	G		G	G	G	T	T					.	.				S		T	T											G	G	G	G	G
Template Predicted Secondary structure		.	.																																						.	.
Template SS confidence
				324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360			.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions