Job Description P18335 Confidence 99.94% Date Thu Jan 5 11:36:49 GMT 2012 Rank 148 Aligned Residues 328 % Identity 14% Template c2dr1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:386aa long hypothetical serine aminotransferase; PDBTitle: crystal structure of the ph1308 protein from pyrococcus horikoshii ot3 Resolution 1.90 Å

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.				.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																										.																					.	.	.
Query SS confidence																										.																					.	.	.
Query Sequence		A	L	G	H	C	H	P	A	L	V	N	A	L	K	T	Q	G	E	T	L	W	H	I	S	.	N	V	F	T	N	E	P	A	L	R	L	G	R	K	L	I	E	A	T	F	.	.	.	A	E	R	V	V	F	M	N	S	G	T	E	A	N	E	T	A	F	K	L	A	R	H	Y	A	C	V	R	H	S	P	F
Query Conservation																										.																					.	.	.
Alig confidence																										.																					.	.	.																						.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.
Template Sequence		L	F	T	A	G	P	V	A	C	F	P	E	V	L	E	I	M	K	V	Q	M	F	S	H	R	S	K	E	Y	R	K	V	H	M	D	T	V	E	R	L	R	E	F	L	E	V	E	K	G	E	V	L	L	V	P	S	S	G	T	G	I	M	E	A	S	I	R	N	G	.	.	.	.	.	.	.	.	V	S	K
Template Known Secondary structure					S	S	S											T	T	S					T	T	S																			T		S	S	S						S	S														.	.	.	.	.	.	.	.	S		T
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.									.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.			.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.
Query SS confidence																																																								.	.
Query Sequence		K	T	K	I	I	A	F	H	N	A	F	H	G	R	S	L	F	T	V	S	V	G	G	Q	P	K	Y	S	D	G	F	G	P	K	P	A	D	I	I	H	V	P	F	N	D	L	H	A	V	K	A	V	M	D	.	.	D	H	T	C	A	V	V	V	E	P	I	Q	G	E	G	G	V	T	A	A	T	P	E	F
Query Conservation																																																								.	.
Alig confidence																							.	.	.	.	.	.																												.	.																					.	.	.	.
Template Conservation																							.	.	.	.	.	.																																																		.	.	.	.
Template Sequence		G	G	K	V	L	V	T	I	I	G	A	F	G	K	R	Y	K	E	V	V	E	.	.	.	.	.	.	S	N	G	R	K	A	V	V	L	E	Y	E	P	G	K	A	V	K	P	E	D	L	D	D	A	L	R	K	N	P	D	V	E	A	V	T	I	T	Y	N	E	T	S	T	G	V	L	N	P	.	.	.	.
Template Known Secondary structure		T								S	S												.	.	.	.	.	.		T	T										T	T																T	T								S			T	T	T	T					.	.	.	.
Template Predicted Secondary structure																							.	.	.	.	.	.																																																		.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.							.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		L	Q	G	L	R	E	L	C	D	Q	H	Q	A	L	L	V	F	D	E	V	Q	C	G	M	G	R	T	G	D	L	F	A	Y	M	H	Y	G	V	T	P	D	I	L	T	S	A	K	A	L	G	G	G	F	P	I	S	A	M	L	T	T	A	E	I	A	S	A	F	H	P	G	S	H	G	S	T	Y	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																										.	.	.																																																			.	.	.
Template Conservation																										.	.	.
Template Sequence		L	P	E	L	A	K	V	A	K	E	H	D	K	L	V	F	V	D	A	V	S	A	M	G	.	.	.	G	A	D	I	K	F	D	K	W	G	L	D	V	V	F	S	S	S	Q	K	A	F	G	V	P	P	G	L	A	I	G	A	F	S	E	R	F	L	E	I	A	E	K	M	P	E	R	G	W	Y	F	D	I
Template Known Secondary structure												T	T								T	T	T	B	T	.	.	.	T	B				T	T	T	T	T		S						T	T	S	T	T				S	S															T	T		T	T			S	T	T
Template Predicted Secondary structure																										.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.				.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
																	286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330		.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	N	P	L	A	C	A	V	A	G	A	A	F	D	I	I	N	T	P	E	V	L	E	G	I	Q	A	K	R	Q	R	F	V	D	H	L	Q	K	I	D	Q	Q	Y	D	.	V	F	S	D	I	R	G	M	G	L	L	I	G	A	E	L	K	P	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.
Template Conservation
Template Sequence		P	L	Y	V	K	Y	L	K	E	K	E	S	T	P	S	T	P	P	M	P	Q	V	F	G	I	N	V	A	L	R	I	I	E	K	M	G	G	K	E	K	W	L	E	M	Y	E	K	R	A	K	M	V	R	E	G	V	R	E	I	G	L	D	I	L	A	E	P	G	H	E	S	P	T	I	T	A	V	L	T	P
Template Known Secondary structure												S	S		S	S																				T	T																							T	T			B	S	S		T	T		B		S	S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.					.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure																								.	.	.	.
Query SS confidence																								.	.	.	.
Query Sequence		Y	K	G	R	A	R	D	F	L	Y	A	G	A	E	A	G	V	M	V	L	N	A	.	.	.	.	G	P	D	V	M	R	F	A	P	S	L	V	V	E	D	A	D	I	D	E	G	M	Q	R	F	A	H	A	V	A	K	V
Query Conservation																								.	.	.	.
Alig confidence																								.	.	.	.
Template Conservation
Template Sequence		P	G	I	K	G	D	E	V	Y	E	A	M	R	K	R	G	F	E	L	A	K	G	Y	G	S	V	K	E	K	T	F	R	I	G	H	M	G	Y	M	K	F	E	D	I	Q	E	M	L	D	N	L	R	E	V	I	N	E	L
Template Known Secondary structure		T	T													T	T								G	G	G	T	T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions