Job Description P18335 Confidence 34.02% Date Thu Jan 5 11:36:49 GMT 2012 Rank 338 Aligned Residues 63 % Identity 5% Template c1vdxA_ PDB info PDB header:ligase Chain: A: PDB Molecule:hypothetical protein ph0099; PDBTitle: crystal structure of a pyrococcus horikoshii protein with2 similarities to 2'5' rna-ligase Resolution 2.40 Å

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		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.			.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure																																					.	.
Query SS confidence																																					.	.
Query Sequence		L	L	I	G	A	E	L	K	P	Q	Y	K	G	R	A	R	D	F	L	Y	A	G	A	E	A	G	V	M	V	L	N	A	G	P	D	.	.	V	M	R	F	A	P	S	L	V	V	E	D	A	D	I	D	E	G	M	Q	R	F	A	H	A	V	A	K
Query Conservation																																					.	.
Alig confidence																																					.	.
Template Conservation
Template Sequence		A	F	I	A	I	D	V	N	E	S	V	R	D	S	L	V	R	A	Q	D	Y	I	G	S	K	E	A	K	I	K	F	V	E	R	E	N	L	H	I	T	L	K	F	L	G	E	I	T	E	E	Q	A	E	E	I	K	N	I	L	K	K	I	A	E	K
Template Known Secondary structure																									S	S	S								G	G	G																												T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions