Email l.a.kelley@imperial.ac.uk Description P77453 Date Thu Jan 5 12:29:24 GMT 2012 Unique Job ID 4612cf2bffc669bd

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1a6ca1 69.0 22 Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins) Superfamily:Positive stranded ssRNA viruses Family:Comoviridae-like VP 2 d1wiia_ 20.5 28 Fold:Rubredoxin-like Superfamily:Zinc beta-ribbon Family:Putative zinc binding domain 3 c2p7vA_ 17.5 18 PDB header:transcription Chain: A: PDB Molecule:regulator of sigma d; PDBTitle: crystal structure of the escherichia coli regulator of sigma 70, rsd,2 in complex with sigma 70 domain 4 4 c2gk9D_ 16.1 45 PDB header:transferase Chain: D: PDB Molecule:phosphatidylinositol-4-phosphate 5-kinase, type PDBTitle: human phosphatidylinositol-4-phosphate 5-kinase, type ii,2 gamma 5 c1a6cA_ 16.0 22 PDB header:virus Chain: A: PDB Molecule:tobacco ringspot virus capsid protein; PDBTitle: structure of tobacco ringspot virus 6 c2q9lA_ 16.0 27 PDB header:hydrolase Chain: A: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of imazg from vibrio dat 722: ctag-imazg (p43212) 7 c3dl8D_ 14.0 44 PDB header:protein transport Chain: D: PDB Molecule:sece; PDBTitle: structure of the complex of aquifex aeolicus secyeg and2 bacillus subtilis seca 8 c2y7uM_ 13.5 15 PDB header:virus Chain: M: PDB Molecule:coat protein; PDBTitle: x-ray structure of the grapevine fanleaf virus 9 d1dxqa_ 11.3 50 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Quinone reductase 10 c3aq0G_ 11.3 11 PDB header:transferase Chain: G: PDB Molecule:geranyl diphosphate synthase; PDBTitle: ligand-bound form of arabidopsis medium/long-chain length prenyl2 pyrophosphate synthase (surface polar residue mutant) 11 d1cmca_ 11.2 43 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:Met repressor, MetJ (MetR) 12 d2id6a2 11.2 18 Fold:Tetracyclin repressor-like, C-terminal domain Superfamily:Tetracyclin repressor-like, C-terminal domain Family:Tetracyclin repressor-like, C-terminal domain 13 c3obcB_ 10.2 21 PDB header:hydrolase Chain: B: PDB Molecule:pyrophosphatase; PDBTitle: crystal structure of a pyrophosphatase (af1178) from archaeoglobus2 fulgidus at 1.80 a resolution 14 d2gtaa1 9.8 8 Fold:all-alpha NTP pyrophosphatases Superfamily:all-alpha NTP pyrophosphatases Family:MazG-like 15 d2oiea1 9.6 23 Fold:all-alpha NTP pyrophosphatases Superfamily:all-alpha NTP pyrophosphatases Family:MazG-like 16 c3a9fA_ 9.5 10 PDB header:electron transport Chain: A: PDB Molecule:cytochrome c; PDBTitle: crystal structure of the c-terminal domain of cytochrome cz2 from chlorobium tepidum 17 d2gtad1 9.4 8 Fold:all-alpha NTP pyrophosphatases Superfamily:all-alpha NTP pyrophosphatases Family:MazG-like 18 c2f3iA_ 9.2 25 PDB header:transferase Chain: A: PDB Molecule:dna-directed rna polymerases i, ii, and iii 17.1 PDBTitle: solution structure of a subunit of rna polymerase ii 19 d1np3a1 8.7 21 Fold:6-phosphogluconate dehydrogenase C-terminal domain-like Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like Family:Acetohydroxy acid isomeroreductase (ketol-acid reductoisomerase, KARI) 20 d1vmga_ 8.5 19 Fold:all-alpha NTP pyrophosphatases Superfamily:all-alpha NTP pyrophosphatases Family:MazG-like 21 d1ebfa1 not modelled 8.2 12 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 22 c2khsB_ not modelled 7.9 27 PDB header:hydrolase Chain: B: PDB Molecule:nuclease; PDBTitle: solution structure of snase121:snase(111-143) complex 23 c2l5fA_ not modelled 7.6 10 PDB header:protein binding Chain: A: PDB Molecule:pre-mrna-processing factor 40 homolog a; PDBTitle: solution structure of the tandem ww domains from hypa/fbp11 24 c2q4pA_ not modelled 7.2 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein rs21-c6; PDBTitle: ensemble refinement of the crystal structure of protein from mus2 musculus mm.29898 25 d2a3qa1 not modelled 7.2 18 Fold:all-alpha NTP pyrophosphatases Superfamily:all-alpha NTP pyrophosphatases Family:MazG-like 26 c3lj4i_ not modelled 7.0 10 PDB header:viral protein Chain: I: PDB Molecule:portal protein; PDBTitle: bacteriophage p22 portal protein bound to middle tail factor gp4. this2 file contain the first biological assembly 27 c3iz5W_ not modelled 6.1 39 PDB header:ribosome Chain: W: PDB Molecule:60s ribosomal protein l22 (l22e); PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome 28 c3p7jA_ not modelled 6.0 16 PDB header:transcription Chain: A: PDB Molecule:heterochromatin protein 1; PDBTitle: drosophila hp1a chromo shadow domain 29 d1pn2a1 not modelled 6.0 33 Fold:Thioesterase/thiol ester dehydrase-isomerase Superfamily:Thioesterase/thiol ester dehydrase-isomerase Family:MaoC-like 30 d1d8ca_ not modelled 6.0 19 Fold:TIM beta/alpha-barrel Superfamily:Malate synthase G Family:Malate synthase G 31 d1pcfa_ not modelled 5.9 13 Fold:ssDNA-binding transcriptional regulator domain Superfamily:ssDNA-binding transcriptional regulator domain Family:Transcriptional coactivator PC4 C-terminal domain 32 d2rm0w1 not modelled 5.8 20 Fold:WW domain-like Superfamily:WW domain Family:WW domain 33 d1unda_ not modelled 5.8 6 Fold:VHP, Villin headpiece domain Superfamily:VHP, Villin headpiece domain Family:VHP, Villin headpiece domain 34 d2hanb1 not modelled 5.8 25 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Nuclear receptor 35 c3oyrA_ not modelled 5.7 15 PDB header:transferase Chain: A: PDB Molecule:trans-isoprenyl diphosphate synthase; PDBTitle: crystal structure of polyprenyl synthase from caulobacter crescentus2 cb15 complexed with calcium and isoprenyl diphosphate 36 d1gpca_ not modelled 5.6 24 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Phage ssDNA-binding proteins 37 c2dzjA_ not modelled 5.5 33 PDB header:sugar binding protein Chain: A: PDB Molecule:synaptic glycoprotein sc2; PDBTitle: 2dzj/solution structure of the n-terminal ubiquitin-like2 domain in human synaptic glycoprotein sc2 38 d1qzpa_ not modelled 5.4 12 Fold:VHP, Villin headpiece domain Superfamily:VHP, Villin headpiece domain Family:VHP, Villin headpiece domain 39 c3efyB_ not modelled 5.4 19 PDB header:cell cycle Chain: B: PDB Molecule:cif (cell cycle inhibiting factor); PDBTitle: structure of the cyclomodulin cif from pathogenic2 escherichia coli 40 c3gp2B_ not modelled 5.4 71 PDB header:metal binding protein/transferase Chain: B: PDB Molecule:calcium/calmodulin-dependent protein kinase type PDBTitle: calmodulin bound to peptide from calmodulin kinase ii2 (camkii) 41 c1cm4B_ not modelled 5.4 71 PDB header:complex (calcium-binding/transferase) Chain: B: PDB Molecule:calmodulin-dependent protein kinase ii-alpha; PDBTitle: motions of calmodulin-four-conformer refinement 42 c1cdmB_ not modelled 5.4 71 PDB header:calcium-binding protein Chain: B: PDB Molecule:calmodulin; PDBTitle: modulation of calmodulin plasticity in molecular2 recognition on the basis of x-ray structures 43 c1cm1B_ not modelled 5.4 71 PDB header:complex (calcium-binding/transferase) Chain: B: PDB Molecule:calmodulin-dependent protein kinase ii-alpha; PDBTitle: motions of calmodulin-single-conformer refinement 44 d2fmma1 not modelled 5.2 23 Fold:SH3-like barrel Superfamily:Chromo domain-like Family:Chromo domain 45 d1thta_ not modelled 5.1 55 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Thioesterases 46 d2o3bb1 not modelled 5.1 40 Fold:Nuclease A inhibitor (NuiA) Superfamily:Nuclease A inhibitor (NuiA) Family:Nuclease A inhibitor (NuiA) 47 c3cbbA_ not modelled 5.0 31 PDB header:transcription/dna Chain: A: PDB Molecule:hepatocyte nuclear factor 4-alpha, dna binding PDBTitle: crystal structure of hepatocyte nuclear factor 4alpha in2 complex with dna: diabetes gene product