Job Description P76471 Confidence 99.41% Date Thu Jan 5 12:23:16 GMT 2012 Rank 1 Aligned Residues 128 % Identity 17% Template d1qj8a_ SCOP info Transmembrane beta-barrels OMPA-like Outer membrane protein Resolution 1.90

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		46	.	.	.	50	.	.	.	.	.	.				.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.							.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure													.	.	.																																					.	.	.	.	.	.
Query SS confidence													.	.	.																																					.	.	.	.	.	.
Query Sequence		L	A	L	S	G	N	W	T	H	N	D	.	.	.	D	D	G	D	V	A	G	V	G	L	G	L	N	L	P	L	G	P	L	M	A	T	V	G	G	K	G	V	Y	T	N	P	N	Y	G	D	.	.	.	.	.	.	E	G	Y	A	A	A	V	G	G	G	L	Q	W	K	I	G	N	S	F	R	L	F	G	E
Query Conservation													.	.	.																																					.	.	.	.	.	.
Alig confidence													.	.	.																																					.	.	.	.	.	.
Template Conservation
Template Sequence		S	T	V	T	G	G	Y	A	Q	S	D	A	Q	G	Q	M	N	K	M	G	G	F	N	L	K	Y	R	Y	E	E	D	N	S	P	L	G	V	I	G	S	F	T	Y	T	E	K	S	R	T	A	S	S	G	D	Y	N	K	N	Q	Y	Y	G	I	T	A	G	P	A	Y	R	I	N	D	W	A	S	I	Y	G	V
Template Known Secondary structure														T	T	T																T	T		S																	T	T	S																				T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		117	.	.	120	.	.	.	.	.	.										.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure												.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.
Query Sequence		Y	Y	Y	S	P	D	S	L	S	S	.	.	.	.	.	.	.	.	.	G	I	Q	S	Y	E	E	A	N	A	G	A	R	Y	T	I	M	R	P	V	S	I	E	A	G	Y	R	Y	L	N	L	S	G	K	D	G	N	R	D	N	A	V	A	D	G	P	Y	V	G	V	N	A	S	F
Query Conservation												.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.
Template Sequence		V	G	V	G	Y	G	K	F	Q	T	T	E	Y	P	T	Y	K	N	D	T	S	D	Y	G	F	S	Y	G	A	G	L	Q	F	N	P	M	E	N	V	A	L	D	F	S	Y	E	Q	S	R	I	R	S	V	D	.	.	.	.	.	.	.	V	G	T	W	I	A	G	V	G	Y	R	F
Template Known Secondary structure														T	T	T																				S	S	T	T													T	T			.	.	.	.	.	.	.
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.								.	.	.	140	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions