 |
Job Description | P76471 | Confidence | 3.18% | Date | Thu Jan 5 12:23:16 GMT 2012 |
Rank | 59 | Aligned Residues | 35 |
% Identity | 20% | Template | c3ts3D_ |
PDB info |
PDB header:viral protein | Chain: D: PDB Molecule:capsid polyprotein; |
PDBTitle: crystal structure of the projection domain of the turkey astrovirus2 capsid protein at 1.5 angstrom resolution
|
Resolution | 1.49 Å |
|
  |   |
141 | . | . | . | . | . | . | . | |
. | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | |
|
|
170 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
| . | . | . |
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
Query Sequence |   |
T | I | M | R | P | V | S | I | . |
E | A | G | Y | R | Y | L | N | L | S | G | K | D | G | N | R | D | N | A | V | A | . |
. |
. |
D | G | P | Y | V | G |
Query Conservation |   |
  |
|   |   |   |   |   |   | . |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   | . | . | . |   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |   |   |
|   |
|
|
|
|   |   |   |
|   |
|   |   |   |   |
|   |   |
|
|
|
|
|
|
|
|
|   |
|   |
Template Sequence |   |
R | Y | N | N | Q | I | T | I | P | S | I | G | Y | R | G | T | L | F | L | L | D | A | A | S | W | W | N | I | L | D | V | T | Q | T | G | V | L | F | G |
Template Known Secondary structure |   |
 |  |  |  |  |  | S | S |
|  |  |  |  |
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
| T | T | T |
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
469 | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|