Job Description P76471 Confidence 97.40% Date Thu Jan 5 12:23:16 GMT 2012 Rank 18 Aligned Residues 147 % Identity 15% Template c3nsgA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein f; PDBTitle: crystal structure of ompf, an outer membrane protein from salmonella2 typhi Resolution 2.79 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.											.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.									.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.
Query Sequence		N	I	G	V	G	F	G	T	E	T	T	G	L	A	L	S	G	N	W	T	H	N	D	.	.	.	.	.	.	.	.	.	.	D	D	G	D	V	A	G	V	G	L	G	L	N	L	P	L	G	P	L	M	A	T	V	G	G	K	G	V	Y	T	N	P	N	Y	G	D	E	G	.	.	.	.	.	.	.	.	Y
Query Conservation																									.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	V	G	Y	T	X	A	Y	E	F	D	G	F	G	V	T	A	A	Y	S	N	S	K	R	T	N	D	Q	Q	D	R	D	G	N	G	D	R	A	E	S	R	A	V	G	A	K	Y	D	A	N	N	V	Y	L	A	A	V	Y	A	E	T	R	N	X	S	I	V	E	N	T	V	T	D	T	V	E	X	A	N	K
Template Known Secondary structure												T	T														S	T	T	S	S	S	S	S			S														T	T											S	S							T	T	T							S
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.					120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170
Predicted Secondary structure																										.	.	.	.																																																		.
Query SS confidence																										.	.	.	.																																																		.
Query Sequence		A	A	A	V	G	G	G	L	Q	W	K	I	G	N	S	F	R	L	F	G	E	Y	Y	Y	.	.	.	.	S	P	D	S	L	S	S	G	I	Q	S	Y	E	E	A	N	A	G	A	R	Y	T	I	M	R	P	V	S	I	E	A	G	Y	R	Y	L	N	L	S	G	K	D	G	N	R	D	N	A	V	.	A	D
Query Conservation																										.	.	.	.																																																		.
Alig confidence																										.	.	.	.																																																		.
Template Conservation
Template Sequence		T	Q	N	L	E	V	V	A	Q	Y	Q	F	D	F	G	L	R	P	A	I	S	Y	V	Q	S	K	G	K	Q	L	N	G	A	G	G	S	A	D	L	A	K	Y	I	Q	A	G	A	T	Y	Y	F	N	K	N	X	N	V	W	V	D	Y	R	F	N	L	L	D	E	N	D	Y	S	S	S	Y	V	G	T	D	D
Template Known Secondary structure														T	T	S														S		T	T	T	T	S																		S	S																S	S		T	T	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		171	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	Y	V	G	V	N	A	S	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	A	A	V	G	I	T	Y	Q	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.	.	.	340	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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