Job Description P76471 Confidence 2.44% Date Thu Jan 5 12:23:16 GMT 2012 Rank 69 Aligned Residues 101 % Identity 16% Template c3dzmB_ PDB info PDB header:unknown function Chain: B: PDB Molecule:hypothetical conserved protein; PDBTitle: crystal structure of a major outer membrane protein from thermus2 thermophilus hb27 Resolution 2.80 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.																							.	.	.	.	.	.	100	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	G	L	A	L	S	G	N	W	T	H	N	D	D	D	G	D	V	A	G	V	G	L	G	L	N	L	P	L	G	P	L	M	A	T	V	G	G	K	G	V	Y	T	N	P	N	Y	G	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	A	A	A	V	G	G
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.
Template Sequence		F	S	V	E	A	G	A	G	F	Y	.	.	.	.	G	G	F	G	G	Q	L	A	V	V	A	E	D	L	A	P	G	L	P	L	G	V	R	L	G	V	G	F	A	T	S	D	A	L	D	D	G	Y	D	L	G	G	G	T	T	W	G	D	V	K	E	A	G	K	F	S	E	W	G	Q	N	V	T	L	S	L
Template Known Secondary structure												.	.	.	.	S	S													S	S	S																	B		T	T		B		S	S	S		B									T
Template Predicted Secondary structure												.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.					.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		102	.	.	.	.			.	.	.								110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.							.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.				.	.	.	.	.	.	.																			.							.	.	.	.	.	.
Query SS confidence							.	.				.	.	.	.	.	.	.																			.							.	.	.	.	.	.
Query Sequence		G	L	Q	W	K	.	.	I	G	N	.	.	.	.	.	.	.	S	F	R	L	F	G	E	Y	Y	Y	S	P	D	S	L	S	S	G	.	I	Q	S	Y	E	E	.	.	.	.	.	.	A	N	A	G	A	R	Y	T	I	M	R	P	V	S	I
Query Conservation							.	.				.	.	.	.	.	.	.																			.							.	.	.	.	.	.
Alig confidence							.	.				.	.	.	.	.	.	.																			.							.	.	.	.	.	.
Template Conservation
Template Sequence		D	V	L	Y	K	P	L	P	V	E	V	A	P	Y	F	G	V	R	Y	N	F	F	S	G	G	Y	T	D	P	E	D	N	L	T	I	K	A	Q	T	I	S	S	N	Q	L	G	L	G	L	G	V	R	A	A	Y	P	L	M	P	N	L	S	L
Template Known Secondary structure										S																					S	S	S	S	S	S																								T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions