Job Description P76471 Confidence 96.74% Date Thu Jan 5 12:23:16 GMT 2012 Rank 22 Aligned Residues 146 % Identity 11% Template c3aehB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:hemoglobin-binding protease hbp autotransporter; PDBTitle: integral membrane domain of autotransporter hbp Resolution 2.00 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.
Predicted Secondary structure																																																						.																			.	.
Query SS confidence																																																						.																			.	.
Query Sequence		S	I	S	G	Q	A	G	K	E	Y	T	N	I	G	V	G	F	G	T	E	T	T	G	L	A	L	S	G	N	W	T	H	N	D	D	D	G	D	V	A	G	V	G	L	G	L	N	L	P	L	G	P	.	L	M	A	T	V	G	G	K	G	V	Y	T	N	P	N	Y	G	D	.	.	E	G	Y	A	A	A	V
Query Conservation																																																						.																			.	.
Alig confidence																								.	.	.									.	.	.																	.																			.	.
Template Conservation																								.	.	.									.	.	.
Template Sequence		Y	F	D	V	I	A	K	Y	I	H	N	E	N	K	Y	D	L	N	F	A	G	A	.	.	.	G	K	Q	N	F	R	S	H	.	.	.	S	L	Y	A	G	A	E	V	G	Y	R	Y	H	L	T	D	T	T	F	V	E	P	Q	A	E	L	V	W	G	R	L	Q	G	Q	N	S	V	N	P	L	V	G	R	T
Template Known Secondary structure																			S	S	T	T		.	.	.									.	.	.																T	T
Template Predicted Secondary structure																								.	.	.									.	.	.
Template SS confidence
		1195	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.				.	.	.	1220	.	.	.	.				.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure											.																				.	.
Query SS confidence											.																				.	.
Query Sequence		G	G	G	L	Q	W	K	I	G	.	N	S	F	R	L	F	G	E	Y	Y	Y	S	P	D	S	L	S	S	G	.	.	I	Q	S	Y	E	E	A	N	A	G	A	R	Y	T	I	M	R	P	V	S	I	E	A	G	Y	R	Y	L	N	L	S	G	K	D	G	N	R	D	N	A	V	A	D	G	P	Y	V	G	V
Query Conservation											.																				.	.
Alig confidence											.																				.	.																														.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.
Template Sequence		G	V	V	S	G	K	T	F	S	G	K	D	W	S	L	T	A	R	A	G	L	H	Y	E	F	D	L	T	D	S	R	K	D	S	R	M	L	Y	G	V	G	L	N	A	R	F	G	D	N	T	R	L	G	L	E	V	E	R	S	A	.	.	.	.	.	.	F	G	K	Y	N	T	D	D	A	I	N	A	N	I
Template Known Secondary structure												S	S																S																			T	T	T												.	.	.	.	.	.	S		S	S
Template Predicted Secondary structure																																																														.	.	.	.	.	.
Template SS confidence
		1284	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.							.	.	.	.	.	.	1350	.	.	.	.	.	.	.
		177	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	S	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	Y	S	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1374	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions