Job Description P76471 Confidence 1.43% Date Thu Jan 5 12:23:16 GMT 2012 Rank 87 Aligned Residues 78 % Identity 18% Template c3a5pD_ PDB info PDB header:sugar binding protein Chain: D: PDB Molecule:haemagglutinin i; PDBTitle: crystal structure of hemagglutinin Resolution 1.82 Å

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		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.											.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.											.										.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.											.										.
Query Sequence		L	Q	W	K	I	G	N	S	F	R	L	F	G	E	Y	Y	Y	S	P	D	S	L	S	S	G	I	Q	S	Y	E	E	A	N	A	G	A	R	Y	T	I	M	R	.	.	.	.	.	.	.	.	.	.	P	V	S	I	E	A	G	Y	R	Y	.	L	N	L	S	G	K	D	G	N	.	R	D	N	A	V	A	D
Query Conservation																																												.	.	.	.	.	.	.	.	.	.											.										.
Alig confidence																																												.	.	.	.	.	.	.	.	.	.											.										.
Template Conservation
Template Sequence		W	S	V	Q	I	V	D	N	A	G	L	G	A	N	L	A	L	Y	P	S	G	N	S	S	T	V	P	R	Y	V	T	V	T	G	Y	A	P	I	T	F	S	E	I	G	P	K	T	V	H	Q	S	W	Y	I	T	V	H	N	G	D	D	R	A	F	Q	L	G	Y	E	G	G	G	V	A	T	A	T	F	T	A
Template Known Secondary structure										S	S		G	G	G					S		S			B	S	S							T	T	B									S				S	S	S	S								T	T									S	S	S									G
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		171	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	Y	V	G	V	N	A	S	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	N	V	S	I	S	T	G	F
Template Known Secondary structure		G	G							S	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions