Job Description P76471 Confidence 9.09% Date Thu Jan 5 12:23:16 GMT 2012 Rank 50 Aligned Residues 152 % Identity 11% Template c2y0lA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:cis-aconitate porin opdh; PDBTitle: crystal structure of pseudomonas aeruginosa opdo Resolution 2.59 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60								.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.
Query Sequence		A	S	V	N	A	M	S	I	S	G	Q	A	G	K	E	Y	T	N	I	G	V	G	F	G	T	E	T	T	G	L	A	L	S	G	N	W	T	H	N	D	D	D	G	D	.	.	.	.	.	.	.	V	A	G	V	G	L	G	L	N	L	P	L	G	P	L	M	A	T	V	G	G	K	G	V	Y	T	N	P	N
Query Conservation																																														.	.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	S	Y	H	Y	S	N	L	Q	D	V	Y	R	Q	H	F	V	G	L	L	H	S	W	P	I	G	P	G	E	L	T	S	D	L	R	F	A	R	S	T	D	S	G	S	A	K	A	G	G	I	D	N	K	S	L	N	G	M	F	T	Y	S	L	G	N	H	A	F	G	A	A	W	Q	R	M	N	G	D	D	A
Template Known Secondary structure										T	T	T															S	S	S															T	T		T	T																	T	T												S	S	S
Template Predicted Secondary structure
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		90	.																					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.																				.		.																	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.																				.		.																	.	.
Query Sequence		Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	G	Y	A	A	A	V	G	G	G	L	Q	W	K	I	.	.	G	N	S	F	R	L	F	G	E	Y	Y	Y	S	P	D	S	L	S	S	.	G	.	I	Q	S	Y	E	E	A	N	A	G	A	R	Y	T	I	M	.	.
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.																				.		.																	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.																				.		.																	.	.
Template Conservation
Template Sequence		F	P	Y	L	E	G	S	N	P	Y	L	V	N	F	V	Q	V	N	D	F	A	G	P	K	E	R	S	W	Q	L	R	Y	D	Y	D	F	V	G	L	G	I	P	G	L	T	F	M	T	R	Y	V	K	G	D	N	V	E	L	A	G	Q	G	E	G	R	E	W	E	R	N	T	E	L	Q	Y	V	F	Q	S	G
Template Known Secondary structure					B	T	T						T	T			S	S					S	T	T												G	G	G	G	T		T	T																S																				S	S
Template Predicted Secondary structure
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
				144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	R	P	V	S	I	E	A	G	Y	R	Y	L	N	L	S	G	K	D	G	N	R	D	N	A	V
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		A	L	K	N	L	G	I	R	W	R	N	A	T	F	R	S	N	F	T	R	D	I	D	E	N	R	L
Template Known Secondary structure		T	T	T	T													S	S	S
Template Predicted Secondary structure
Template SS confidence
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions