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Job DescriptionP76471
Confidence97.66%DateThu Jan 5 12:23:16 GMT 2012
Rank16Aligned Residues134
% Identity21%Templatec2x4mD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:coagulase/fibrinolysin; PDBTitle: yersinia pestis plasminogen activator pla
Resolution2.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   45....50.........60.........70.........80...... ...90........ .100.........110.
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Query Sequence  GLALSGNWTHNDDDGDVAGVGLGLNLPLGPLMATVGGKGVYT. . . . NPNYGDEGYAAA. . . . . . . . . VGGGLQWKIGNSF
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Template Sequence  EYDLNVKGWLLQDENYKAGITAGY. QETRFSWTATGGSYSYNNGAYTGNFPKGVRVIGYNQRFSMPYIGLAGQYRIN. DF
Template Known Secondary structure  S


SS.S
TTTT

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   111........120.........130.... .....140.........150.........160.........170.........180...... ..
 
   112.......120.........130... ......140.........150.........160... ......170.
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Query Sequence  RLFGEYYYSPDSLSSGIQSYEE. . . . . . . . . . . . . . . . ANAGARYTIMRPVSIEAGYRYLNLSGKDGN. RDNAVADG. . .
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Template Sequence  ELNALFKFSDWVRAHDNDEHYMRDLTFREKTSGSRYYGTVINAGYYVTPNAKVFAEFTYSKYDEGKGGTQTIDKNSGDSV
Template Known Secondary structure  GGGTTTTTT

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   189190.........200.........210.........220.........230.........240.........250.........260........
 
   172.......180
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Query Sequence  . . . . . . . . . . . . . . . PYVGVNASF
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Template Sequence  SIGGDAAGISNKNYTVTAGLQYRF
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   269270.........280.........290..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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