Job Description P76471 Confidence 98.90% Date Thu Jan 5 12:23:16 GMT 2012 Rank 8 Aligned Residues 147 % Identity 14% Template c2f1tB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:outer membrane protein w; PDBTitle: outer membrane protein ompw Resolution 3.00 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.									.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.
Query Sequence		Q	A	G	K	E	Y	T	N	I	G	V	G	F	G	T	E	T	T	G	L	A	L	S	G	N	W	T	H	N	D	D	D	G	D	V	A	G	V	G	L	G	L	N	L	P	L	G	P	L	M	A	T	V	G	G	K	G	V	Y	T	N	P	N	Y	G	D	.	.	.	.	.	.	.	.	E	G	Y	A	A	A
Query Conservation																																																																				.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.																.																					.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.																.
Template Sequence		E	A	G	E	F	F	M	R	A	G	S	A	T	V	R	P	T	E	G	G	G	F	S	V	.	.	.	.	.	.	T	N	N	T	Q	L	G	L	T	F	T	Y	M	A	T	.	D	N	I	G	V	E	L	L	A	A	T	P	F	R	H	K	I	G	T	R	A	T	G	D	I	A	T	V	H	H	L	P	P	T
Template Known Secondary structure			T	T																						.	.	.	.	.	.																.	T	T									S									T	T	T
Template Predicted Secondary structure																										.	.	.	.	.	.																.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.							.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		99	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.																		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure									.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	G	G	G	L	Q	W	.	K	I	G	N	S	F	R	L	F	G	E	Y	Y	Y	S	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	S	S	G	I	Q	S	Y	E	E	A	N	A	G	A	R	Y	T	I	M	R	P	V	S	I	E	A	G	Y	R	Y	L	N	L	S	G	K
Query Conservation									.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	M	A	Q	W	Y	F	G	D	A	S	S	K	F	R	P	Y	V	G	A	G	I	N	Y	T	T	F	F	D	N	G	F	N	D	H	G	K	E	A	G	L	S	D	L	S	L	K	D	S	W	G	A	A	G	Q	V	G	V	D	Y	L	I	N	R	D	W	L	V	N	M	S	V	W	Y	M	D	I	D	T	T
Template Known Secondary structure									S		T	T		S																										T	T																							S	S	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		161									.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure			.	.	.	.	.	.	.	.									.
Query SS confidence			.	.	.	.	.	.	.	.									.
Query Sequence		D	.	.	.	.	.	.	.	.	G	N	R	D	N	A	V	A	.	D	G	P	Y	V	G	V	N	A	S	F
Query Conservation			.	.	.	.	.	.	.	.									.
Alig confidence			.	.	.	.	.	.	.	.									.
Template Conservation
Template Sequence		A	N	Y	K	L	G	G	A	Q	Q	H	D	S	V	R	L	D	P	W	V	F	M	F	S	A	G	Y	R	F
Template Known Secondary structure							S	S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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