Job Description P76471 Confidence 3.52% Date Thu Jan 5 12:23:16 GMT 2012 Rank 57 Aligned Residues 150 % Identity 13% Template c1xkhC_ PDB info PDB header:membrane protein Chain: C: PDB Molecule:ferripyoverdine receptor; PDBTitle: pyoverdine outer membrane receptor fpva from pseudomonas aeruginosa2 pao1 bound to pyoverdine Resolution 3.60 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.																											60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query Sequence		E	Y	T	N	I	G	V	G	F	G	T	E	T	T	G	L	A	L	S	G	N	W	T	H	N	D	D	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	A	G	V	G	L	G	L	N	.	L	P	L	G	P	L	M	A	T	V	G	G	K	G
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation
Template Sequence		Q	N	Y	E	I	G	I	K	G	E	Y	L	D	G	R	L	N	T	S	L	A	Y	F	E	I	H	E	E	N	R	A	E	E	D	A	L	Y	N	S	K	P	T	N	P	A	I	T	Y	A	Y	K	G	I	K	A	K	T	K	G	Y	E	A	E	I	S	G	E	L	A	P	G	W	Q	V	Q	A	G	Y	T	H
Template Known Secondary structure													T	T	T	T																				S	S	T	T	S					T	T		S																					S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		614	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.
		84	.	.	.	.	.	90	.	.	.	.							.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.												120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.															.												.	.	.	.	.	.	.	.	.	.	.									.
Query SS confidence													.	.	.	.	.	.															.												.	.	.	.	.	.	.	.	.	.	.									.
Query Sequence		V	Y	T	N	P	N	Y	G	D	E	G	.	.	.	.	.	.	Y	A	A	A	V	G	G	G	L	Q	W	K	I	G	.	N	S	F	R	L	F	G	E	Y	Y	Y	.	.	.	.	.	.	.	.	.	.	.	S	P	D	S	L	S	S	G	.	I	Q	S	Y	E	E	A	N	A	G	A	R	Y	T	I	M	R
Query Conservation													.	.	.	.	.	.															.												.	.	.	.	.	.	.	.	.	.	.									.
Alig confidence													.	.	.	.	.	.															.												.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation
Template Sequence		K	I	I	R	D	D	S	G	K	K	V	S	T	W	E	P	Q	D	Q	L	S	L	Y	T	S	Y	K	F	K	G	A	L	D	K	L	T	V	G	G	G	A	R	W	Q	G	K	S	W	Q	X	V	Y	N	N	P	R	S	R	W	E	K	F	S	Q	E	D	Y	W	L	V	D	L	X	A	R	Y	Q	I	T	D
Template Known Secondary structure							T	T			B			T	T	S		S													G	G	G	T	T																				G	G	G																							S	S
Template Predicted Secondary structure
Template SS confidence
		694	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.
		145	.	.	.	.	150	.	.							.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure										.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.
Query Sequence		P	V	S	I	E	A	G	Y	.	.	.	.	.	.	R	Y	L	N	L	S	G	K	D	G	N	R	D	N	A	V	A	D	G	P	Y	V	G	V	N	A	S	F
Query Conservation										.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.
Template Conservation
Template Sequence		K	L	S	A	S	V	N	V	N	N	V	F	D	K	T	Y	Y	T	N	I	G	F	Y	T	S	A	S	Y	G	D	P	R	N	L	X	F	S	T	R	W	D	F
Template Known Secondary structure		S								T	T	T	T								S		S	S	S								S								S
Template Predicted Secondary structure
Template SS confidence
		774	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions