 |
Job Description | P32701 | Confidence | 72.41% | Date | Thu Jan 5 11:50:21 GMT 2012 |
Rank | 169 | Aligned Residues | 65 |
% Identity | 15% | Template | d2bhua3 |
SCOP info | TIM beta/alpha-barrel
| (Trans)glycosidases
| Amylase, catalytic domain
|
Resolution | 1.1 |
|
 |
  |   |
401 | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | V | D | K | M | T | P | I | I | L | A | F | R | Q | A | G | Y | E | V | A | I | . |
. |
. |
. |
. |
. |
. |
. |
D | D | F | G | I | G | Y | S | N | L | H | N | L | K | S | L | N | V | D | I | L | K | I | D | K | S | F | V | E | T | L | T | T | H | K | T | S | H | L | I | A | E | H | I | I | E | L | A | H | S | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |
| . | . | . | . | . | . | . | . |
|
|
|
|   |
|   |   |   |
|   |   |
|   |   |
|   |   |
|   |
|
|
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |   |
|
|
|
|   |   |
|
|
|   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |
|
|   | . | . | . | . | . | . | . | . |   |   |
|   |   |   |
|
|   |   |   | . | . | . | . | . | . | . | . |
|
|   |   |
|
|   |   |
|
|   |   |
|
|   |   |
Template Sequence |   |
T | Y | R | A | A | A | E | K | L | P | Y | L | K | E | L | G | V | T | A | I | Q | V | M | P | L | A | A | F | D | G | Q | R | G | W | G | Y | D | . |
. |
. |
. |
. |
. |
. |
. |
G | A | A | F | Y | A | P | Y | A | P | Y | . |
. |
. |
. |
. |
. |
. |
. |
G | R | P | E | D | L | M | A | L | V | D | A | A | H | R | L |
Template Known Secondary structure |   |
S |  |  |  |  |  |  | T |  |  |  |  |  |  |  | T |
|
|  |  |  |  |
|
|
|  |  |
| S | S | S |
|
|
| S | T | T | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |
| G | G | G | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
142 | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | 180 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . |
  |
  |   |
473 | . | . | . | . | . | . | 480 | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | L | K | T | I | A | E | G | V |
Query Conservation |   |
  |   |   |
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|
|   |
|
Template Sequence |   |
G | L | G | V | F | L | D | V | V |
Template Known Secondary structure |   |
T |
|  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
  |   |
206 | . | . | . | 210 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|