Return to main results Retrieve Phyre Job Id

Job DescriptionP32701
Confidence43.80%DateThu Jan 5 11:50:21 GMT 2012
Rank271Aligned Residues109
% Identity17%Templatec3h1gA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:chemotaxis protein chey homolog; PDBTitle: crystal structure of chey mutant t84a of helicobacter pylori
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   400.........410.........420.........430.... .....440.........450.........460.........470.......
Predicted Secondary structure 













.












.
Query SS confidence 


































.










































.
Query Sequence  LDVDKMTPIILAFRQAGYEVAIDDFGIGYSNLHNL. KSLNVDILKIDKSFVETLTTHKTSHLIAEHIIELAHSLGLKTI.
Query Conservation              
   
  
 




 
   
  
.  
  
 



  

  
         
  
   
  
   

.
Alig confidence 


















.














.










....



.






















.
Template Conservation 
       
   
   
  . 
       


         
 

 
....  
 .   
      

        


 
Template Sequence  DSSTMRRIIKNTLSRLGYE. DVLEAEHGVEAWEKLDANADTKVLITD. . . . WNMP. EMNGLDLVKKVRSDSRFKEIPIIM
Template Known Secondary structure  S
TT

.
SS
TT


....S

S.SS
TSTT
TT

Template Predicted Secondary structure 




.








....



.









Template SS confidence 















































































   8.10.........20...... ...30.........40.........50... .... ..60.........70.........80.
 
   478.480.........490.........500.........510........
Predicted Secondary structure 
















Query SS confidence 








































Query Sequence  AEGVETEEQVNWLRKRGVRYCQGWFFAKAMPPQVFMQWMEQ
Query Conservation 




   
   
   
    

     
            
Alig confidence 




















....















Template Conservation 

              
    ....
 

     
   
  
Template Sequence  ITAEGGKAEVITALKAGVNNY. . . . IVKPFTPQVLKEKLEV
Template Known Secondary structure  S

ST

....S


Template Predicted Secondary structure 







....



Template SS confidence 








































   82.......90.........100.. .......110........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions