Job Description P32701 Confidence 100.00% Date Thu Jan 5 11:50:21 GMT 2012 Rank 2 Aligned Residues 368 % Identity 21% Template c3gfzB_ PDB info PDB header:hydrolase, signaling protein Chain: B: PDB Molecule:klebsiella pneumoniae blrp1; PDBTitle: klebsiella pneumoniae blrp1 ph 6 manganese/cy-digmp complex Resolution 2.05 Å

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		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.						.	.	.	.	.	170
Predicted Secondary structure																																																																							.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.
Query Sequence		L	I	Y	A	R	D	N	H	F	L	C	S	S	L	I	A	P	V	N	G	Y	T	I	A	P	A	D	Y	K	R	E	P	N	V	S	I	Y	Y	Y	R	D	T	P	F	F	S	G	Y	K	M	T	Y	M	Q	R	G	N	Y	V	A	V	I	N	P	L	F	W	S	E	.	.	.	.	.	V	M	S	D	D	P
Query Conservation																																																																							.	.	.	.	.
Alig confidence																																																			.	.																			.	.	.	.	.
Template Conservation																																																			.	.
Template Sequence		L	I	Y	R	S	Q	V	H	P	D	R	P	P	V	D	L	D	A	L	V	H	R	A	S	S	K	N	L	P	L	G	I	T	G	I	L	L	F	N	G	L	Q	F	F	Q	V	L	E	G	.	.	T	E	E	A	L	E	S	L	F	S	E	I	Q	S	D	P	R	H	R	D	V	V	E	L	M	R	D	Y	S
Template Known Secondary structure										T	T	S																				T									S	S									.	.														T		T	T
Template Predicted Secondary structure																																																			.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	Q	W	G	V	Y	D	T	V	T	K	T	F	F	S	L	S	K	E	A	S	A	A	T	F	S	P	L	I	H	L	K	D	L	T	V	Q	R	N	G	Y	L	Y	A	T	V	Y	S	T	K	R	P	I	A	A	I	V	A	T	S	Y	Q	R	L	I	T	H	F	Y	N	H	L	I	F	A	L	P	A	G
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	Y	R	R	F	H	G	T	G	M	R	I	L	D	L	R	L	F	E	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	L	E	E	I	L	R	F	S	T	F	G	V	T	E	P	V	N	D	R	M	F	R	L	L	S	A	F	I	A	D
Template Known Secondary structure		S	S		S			S	S	S						G	G	G			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														S	S		G	G	G	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.																												.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		I	L	G	S	L	V	L	L	L	L	W	L	R	I	R	Q	N	Y	L	S	P	K	R	K	L	Q	R	A	L	E	K	H	Q	L	C	L	Y	Y	Q	P	I	I	D	I	K	T	E	K	C	I	G	A	E	A	L	L	R	W	P	G	E	Q	G	.	Q	I	M	N	P	A	E	F	I	P	L	A	E	K	E	G
Query Conservation																																																																	.
Alig confidence													.	.	.	.	.	.																																															.
Template Conservation													.	.	.	.	.	.
Template Sequence		G	G	R	Y	C	L	P	E	P	L	Q	.	.	.	.	.	.	P	S	R	W	M	M	M	A	P	Q	H	L	P	G	Q	P	C	Q	F	A	L	Q	A	I	V	E	P	A	K	K	R	V	S	S	F	E	A	L	I	R	S	P	T	G	G	S	P	V	E	M	F	A	A	I	A	A	E	D	R	Y	R	F	D
Template Known Secondary structure		G	G	G	G				G	G	G		.	.	.	.	.	.	G	G	G										T	T	S	S											T	T	T	T												T	T	S									T	S		G	G	G
Template Predicted Secondary structure													.	.	.	.	.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.							.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.		.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400		.	.	.	.	.	.	.
Predicted Secondary structure																																								.																																		.
Query SS confidence																																								.																																		.
Query Sequence		M	I	E	Q	I	T	D	Y	V	I	D	N	V	F	R	D	L	G	D	Y	L	A	T	H	A	D	R	Y	V	S	I	N	L	S	A	S	D	F	.	H	T	S	R	L	I	A	R	I	N	Q	K	T	E	Q	Y	A	V	R	P	Q	Q	I	K	F	E	V	T	E	H	A	F	L	.	D	V	D	K	M	T	P
Query Conservation																																								.																																		.
Alig confidence																.	.	.	.	.	.	.	.																	.																																		.
Template Conservation																.	.	.	.	.	.	.	.
Template Sequence		L	E	S	K	A	Y	A	F	A	L	A	G	Q	L	.	.	.	.	.	.	.	.	P	L	G	K	H	Q	L	A	I	N	L	L	P	G	S	L	Y	H	H	P	D	A	V	G	W	L	M	D	S	L	L	A	A	G	L	R	P	D	Q	V	L	I	E	V	T	E	T	E	V	I	T	C	F	D	Q	F	R	K
Template Known Secondary structure				T											T	.	.	.	.	.	.	.	.	T			S														S	S	S	S												T	T			G	G	G												T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.									230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	L	A	F	R	Q	A	G	Y	E	V	A	I	D	D	F	G	I	G	Y	S	N	L	H	N	L	K	S	L	N	V	D	I	L	K	I	D	K	S	F	V	E	T	L	T	T	H	K	T	S	H	L	I	A	E	H	I	I	E	L	A	H	S	L	G	L	K	T	I	A	E	G	V	E	T	E	E	Q	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	K	A	L	R	V	A	G	M	K	L	A	I	D	D	F	G	A	G	Y	S	G	L	S	L	L	T	R	F	Q	P	D	K	I	K	V	D	A	E	L	V	R	D	I	H	I	S	G	T	K	Q	A	I	V	A	S	V	V	R	C	C	E	D	L	G	I	T	V	V	A	E	G	V	E	T	L	E	E	W
Template Known Secondary structure										T									T	S	S	S			S	T								S										T	T	G	G	G	B																		T										S
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
		488	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	W	L	R	K	R	G	V	R	Y	C	Q	G	W	F	F	A	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	W	L	Q	S	V	G	I	R	L	F	Q	G	F	L	F	S	R	P
Template Known Secondary structure							T	T						S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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