 |
Job Description | P32701 | Confidence | 39.43% | Date | Thu Jan 5 11:50:21 GMT 2012 |
Rank | 287 | Aligned Residues | 114 |
% Identity | 11% | Template | c3ct7E_ |
PDB info |
PDB header:isomerase | Chain: E: PDB Molecule:d-allulose-6-phosphate 3-epimerase; |
PDBTitle: crystal structure of d-allulose 6-phosphate 3-epimerase2 from escherichia coli k-12
|
Resolution | 2.50 Å |
|
 |
  |   |
403 | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | |
|
. | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | |
|
. | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | |
|
. | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
| . | . |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
Query Sequence |   |
D | K | M | T | P | I | I | L | A | F | R | Q | A | G | Y | E | V | A | I | D | D | F | G | I | G | Y | S | N | L | H | N | L | K | S | L | . |
. |
N | V | D | I | L | K | I | D | K | S | F | V | E | T | L | T | T | . |
. |
H | K | T | S | H | L | I | A | E | H | I | I | E | L | A | H | S | L | . |
. |
G | L | K | T |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |
|
|
|
|
|   |
|   |   |   |
|   |   |
|   |   |
| . | . |   |   |
|   |
|
|
|
|   |   |
|
|   |   |
|   |   | . | . |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
| . | . |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   | . | . |
|   |
|   |
|   |   |
|   |   |   |   |   |
|   |   |   |
|   |
|   |   |
|
|
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
G | Q | A | F | R | L | I | D | E | I | R | R | H | D | M | K | V | G | L | I | . |
. |
L | N | P | E | T | P | V | E | A | M | K | Y | Y | I | H | K | A | D | K | I | T | V | M | T | V | D | P | G | F | A | G | Q | P | F | I | P | E | M | L | D | K | L | A | E | L | K | A | W | R | E | R | E | G | L | E | Y | E | I |
Template Known Secondary structure |   |
T | T |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  | . | . |  |
| T | T |
|
| G | G | G | G | T | T | T | G | G | G |
| S |  |  |  |  |  | S | S |
| T | T |
| S | S |
|
|
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  | . | . |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
93 | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | |
|
. | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 |
  |
  |   |
477 | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | |
. | . | 500 | |
|
. | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  | . |  |  |
| . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | A | E | G | V | E | T | E | E | Q | V | N | W | L | R | K | R | G | V | R | Y | . |
C | Q | G | . |
. |
W | F | F | A | K | A | M | P | P | Q | V | F | M | Q | W | M | E | Q |
Query Conservation |   |
|
|
|
|
|
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   | . |   |
|
| . | . |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|   |   |
|   |
|   |   |   |   |   |   |
|
|
|   |
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
Template Sequence |   |
E | V | D | G | S | C | N | Q | A | T | Y | E | K | L | M | A | A | G | A | D | V | F | I | V | G | T | S | G | L | F | N | H | A | E | N | I | D | E | A | W | R | I | M | T | A |
Template Known Secondary structure |   |
 |  |  | S |
|
| S | T | T | T |  |  |  |  |  |  |  | T |
|
|  |  |  |  |
| T | T | T | T | G | G | G |
| S | S |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
171 | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|