Job Description P32701 Confidence 39.33% Date Thu Jan 5 11:50:21 GMT 2012 Rank 289 Aligned Residues 100 % Identity 19% Template c2v9dB_ PDB info PDB header:lyase Chain: B: PDB Molecule:yage; PDBTitle: crystal structure of yage, a prophage protein belonging to2 the dihydrodipicolinic acid synthase family from e. coli3 k12 Resolution 2.15 Å

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		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.		.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		V	T	E	H	A	F	L	D	V	D	K	M	T	P	I	I	L	A	F	R	Q	A	G	Y	.	E	V	A	I	D	D	F	G	I	G	Y	S	N	L	H	N	L	K	S	L	N	V	D	I	L	K	I	D	K	S	F	V	E	T	L	T	T	H	K	T	S	H	L	I	A	E	H	I	I	E	L	A	H	S	L
Query Conservation																										.
Alig confidence																										.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		F	T	A	D	G	Q	L	D	K	P	G	T	A	A	L	I	D	D	L	I	K	A	G	V	D	G	L	F	F	L	G	S	G	G	E	F	S	Q	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	E	R	K	A	I	A	R	F	A	I	D	H	V	D	R	.
Template Known Secondary structure		B		T	T	S	S	B															T	T		S					S	S	T	T	T	T	G	G	G	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																T	T	.
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.																							.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		473	.	.	.	.	.	.	480	.	.	.	.							.	.	.	.	.	490	.	.	.	.	.	.	.			.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.														.	.
Query SS confidence														.	.	.	.	.	.														.	.
Query Sequence		G	L	K	T	I	A	E	G	V	E	T	E	.	.	.	.	.	.	E	Q	V	N	W	L	R	K	R	G	V	R	Y	.	.	C	Q	G	W	F	F	A	K	A	M	P	P	Q	V	F	M	Q	W	M	E	Q
Query Conservation														.	.	.	.	.	.														.	.
Alig confidence								.						.	.	.	.	.	.														.	.										.
Template Conservation								.																																				.
Template Sequence		R	V	P	V	L	I	.	G	T	G	G	T	N	A	R	E	T	I	E	L	S	Q	H	A	Q	Q	A	G	A	D	G	I	V	V	I	N	P	Y	Y	W	K	V	.	S	E	A	N	L	I	R	Y	F	E	Q
Template Known Secondary structure		S	S					.				S	S																T		S								S	S	S			.
Template Predicted Secondary structure								.																																				.
Template SS confidence
		82	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions