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Job DescriptionP32701
Confidence93.19%DateThu Jan 5 11:50:21 GMT 2012
Rank30Aligned Residues150
% Identity15%Templatec2pz0B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:glycerophosphoryl diester phosphodiesterase; PDBTitle: crystal structure of glycerophosphodiester phosphodiesterase (gdpd)2 from t. tengcongensis
Resolution1.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   339340.........350.........360.........370.........380.........390.........400.........410........
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Query Sequence  IDNVFRDLGDYLATHADRYVSINLSASDFHTSRLIARINQKTEQYAVRPQQIKFEVTEHAFLDVDKMTPIILAFRQAGYE
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Template Sequence  LYEVFELIG. . . . . DKDFLVNIEIKSGIVLYPGIEEKLIKAIKEYNFEERVIISSFNHYSLRDVKK. . . . . . . . MAPHLK
Template Known Secondary structure  T.....TS



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   102.......110 .........120.........130.........140.........150.........160.. ......
 
   419420.........430.........440.........450.........460.........470.........480.........490........
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Query Sequence  VAIDDFGIGYSNLHNLKSLNVDILKIDKSFVETLTTHKTSHLIAEHIIELAHSLGLKTIAEGVETEEQVNWLRKRGVRYC
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Template Sequence  IGLLYQCGLVEPWHMALRMEAYSLHPFYFNII. . . . . . . . . . . . PELVEGCKKNGVKLFPWTVDRKEDMERMIKAGVDGI
Template Known Secondary structure 
S

SSTTT
SBGGG

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   169170.........180.........190.........200 .........210.........220.........230......
 
   499500.........510.........
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Query Sequence  QGWFFAKAMPPQVFMQWMEQL
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Template Sequence  ITDD. . . . . . PETLINLVRKG
Template Known Secondary structure  S
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   237..240 .........250.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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