 |
Job Description | P32701 | Confidence | 58.75% | Date | Thu Jan 5 11:50:21 GMT 2012 |
Rank | 221 | Aligned Residues | 49 |
% Identity | 14% | Template | c2f9rC_ |
PDB info |
PDB header:hydrolase | Chain: C: PDB Molecule:sphingomyelinase d 1; |
PDBTitle: crystal structure of the inactive state of the smase i, a2 sphingomyelinase d from loxosceles laeta venom
|
Resolution | 1.85 Å |
|
  |   |
469 | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | H | S | L | G | L | K | T | I | A | E | G | V | E | T | E | E | Q | V | N | W | L | R | K | R | G | V | R | Y | C | Q | G | W | F | F | A | K | A | M | P | P | Q | V | F | M | Q | W | M | E | Q | L | P | A | R | E |
Query Conservation |   |
|   |   |
|   |   |   |
|
|
|
|
|
|
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |
|   |   |
|
|
|
|   |   |   |   |   |   |   |
|
|   |   |
|
|
|
|
|
|
|
|   | . | . | . | . | . | . |
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |
Template Sequence |   |
A | N | G | F | I | N | K | I | Y | Y | W | S | V | D | K | V | S | T | T | K | A | A | L | D | V | G | V | D | G | I | M | T | N | Y | . |
. |
. |
. |
. |
. |
P | N | V | L | I | G | V | L | K | E | S | G | Y | N | D |
Template Known Secondary structure |   |
T | T |
|
|
|
|  |  |  |  | T | T |
|
| S |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  | S |
| . | . | . | . | . | . |  |  |  |  |  |  |  | T | T | S | T | T | T | T | T |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
| . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | |
|
|
|
|
|
. | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|