Job Description P32701 Confidence 99.54% Date Thu Jan 5 11:50:21 GMT 2012 Rank 11 Aligned Residues 182 % Identity 9% Template c1w25B_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:stalked-cell differentiation controlling protein; PDBTitle: response regulator pled in complex with c-digmp Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	Q	K	R	M	L	N	I	I	R	G	Y	L	Y	I	N	E	L	I	Y	A	R	D	N	H	F	L	C	S	S	L	I	A	P	V	N	G	Y	T	I	A	P	A	D	Y	K	R	E	P	N	V	S	I	Y	Y	Y	R	D	T	P	F	F	S	G	Y	K	M	T	Y	M	Q	R	G	N	Y	V	A	V	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	R	K	R	Y	T	D	Y	L	R	N	N	L	D	H	S	L	E	L	A	V	T	D	Q	L	T	G	L	H	N	R	R	Y	M	T	G	Q	L	D	S	L	V	K	R	A	T	L	G	G	D	P	V	S	A	L	L	I	D	I	D	F	F	K	K	I	N	D	T	F	G	H	D	I	G	D	E	V	L	R	E
Template Known Secondary structure												S	S	S	S			S	T	T			B		T	T	T		S	B																		T	S	S											T	T								S
Template Predicted Secondary structure
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.				.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																																		.	.	.
Query SS confidence																																																		.	.	.
Query Sequence		N	P	L	F	W	S	E	V	M	S	D	D	P	T	L	Q	W	G	V	Y	D	T	V	T	K	T	F	F	S	L	S	K	E	A	S	A	A	T	F	S	P	L	I	H	L	K	D	L	.	.	.	T	V	Q	R	N	G	Y	L	Y	A	T	V	Y	S	T	K	R	P	I	A	A	I	V	A	T	S	Y	Q	R
Query Conservation																																																		.	.	.
Alig confidence																																																		.	.	.
Template Conservation
Template Sequence		F	A	L	R	L	A	S	N	V	R	A	I	D	L	P	C	R	Y	G	G	E	E	F	V	V	I	M	P	D	T	A	L	A	D	A	L	R	I	A	E	R	I	R	M	H	V	S	G	S	P	F	T	V	A	H	G	R	E	M	L	N	V	T	I	S	I	G	V	S	A	T	A	G	E	G	D	T	P	E	A
Template Known Secondary structure									T	S		T	T	S						S	S	S							T	T																			S	S					S	T	T	S																S	T	T
Template Predicted Secondary structure
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	T	H	F	Y	N	H	L	I	F	A	L	P	A	G	I	L	G	S	L	V	L	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	K	R	A	D	E	G	V	Y	Q	A	K	A	S	G	R	N	A	V	V	G	K	A	A
Template Known Secondary structure																T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions