Job Description P10907 Confidence 100.00% Date Thu Jan 5 11:32:26 GMT 2012 Rank 9 Aligned Residues 350 % Identity 25% Template c3gd7C_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:fusion complex of cystic fibrosis transmembrane PDBTitle: crystal structure of human nbd2 complexed with n6-2 phenylethyl-atp (p-atp) Resolution 2.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.
Predicted Secondary structure															.																																																														.	.
Query SS confidence															.																																																														.	.
Query Sequence		A	G	L	K	L	Q	A	V	T	K	S	W	D	.	G	K	T	Q	V	I	K	P	L	T	L	D	V	A	D	G	E	F	I	V	M	V	G	P	S	G	C	G	K	S	T	L	L	R	M	V	A	G	L	E	R	V	T	E	G	D	I	W	I	N	D	Q	R	V	T	E	M	E	P	K	D	.	.	R	G	I
Query Conservation															.																																																														.	.
Alig confidence															.																																									.																					.	.
Template Conservation																																																								.
Template Sequence		G	Q	M	T	V	K	D	L	T	A	K	Y	T	E	G	G	N	A	I	L	E	N	I	S	F	S	I	S	P	G	Q	R	V	G	L	L	G	R	T	G	S	G	K	S	T	L	L	S	A	F	L	R	L	L	.	N	T	E	G	E	I	Q	I	D	G	V	S	W	D	S	I	T	L	E	Q	W	R	K	A	F
Template Known Secondary structure													S	S	T	T	S													T	T									T	T	S	S									T	T		S	.									T	T			S	S	S	S						G	G	G
Template Predicted Secondary structure																																																								.
Template SS confidence
		1208	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.		.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110					.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																		.	.	.	.
Query SS confidence																																		.	.	.	.
Query Sequence		A	M	V	F	Q	N	Y	A	L	Y	P	H	M	S	V	E	E	N	M	A	W	G	L	K	I	R	G	M	G	K	Q	Q	.	.	.	.	I	A	E	R	V	K	E	A	A	R	I	L	E	L	D	G	L	L	K	R	R	P	R	E	L	S	G	G	Q	R	Q	R	V	A	M	G	R	A	I	V	R	D	P	A
Query Conservation																																		.	.	.	.
Alig confidence														.																				.	.	.	.
Template Conservation														.
Template Sequence		G	V	I	P	Q	K	V	F	I	F	S	G	.	T	F	R	K	N	L	D	P	N	A	A	H	S	D	Q	E	I	W	K	V	A	D	E	V	G	L	R	S	V	I	E	Q	F	P	G	K	L	D	F	V	L	V	D	G	G	C	V	L	S	H	G	H	K	Q	L	M	C	L	A	R	S	V	L	S	K	A	K
Template Known Secondary structure					S							S	S	.	B							T	T	S		S										T	T	T	T		T	T	T	G	G	G	S	T	T	G	G	G		B			T	T	T	T	T	S																T	T
Template Predicted Secondary structure														.
Template SS confidence
		1287	.	.	1290	.	.	.	.	.	.	.	.		.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	L	F	D	E	P	L	S	N	L	D	A	K	L	R	V	Q	M	R	L	E	L	Q	Q	L	H	R	R	L	K	T	T	S	L	Y	V	T	H	D	Q	V	E	A	M	T	L	A	Q	R	V	M	V	M	N	G	G	V	A	E	Q	I	G	T	P	V	E	V	Y	E	K	P	A	S	L	F	V	A	S	F
Query Conservation
Alig confidence																											.	.	.
Template Conservation																											.	.	.
Template Sequence		I	L	L	L	D	E	P	S	A	H	L	D	P	V	T	Y	Q	I	I	R	R	T	L	K	Q	.	.	.	A	F	A	D	C	T	V	I	L	C	E	A	R	I	E	A	M	L	E	C	D	Q	F	L	V	I	E	E	N	K	V	R	Q	Y	D	S	I	L	E	L	Y	H	Y	P	A	D	R	F	V	A	G	F
Template Known Secondary structure							S					S															.	.	.	T	T	T	T	S							S	S	G	G	G	S	T	T		S							S	S						S										S	B					T	T
Template Predicted Secondary structure																											.	.	.
Template SS confidence
		1366	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390				.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.							.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.
Query Sequence		I	G	S	P	A	M	N	L	L	T	G	R	V	N	N	E	G	T	H	F	E	L	.	.	.	.	.	.	D	G	G	I	E	L	P	L	N	G	G	Y	R	Q	Y	A	G	R	K	M	T	L	G	I	R	P	E	H	I	A	L	S	S	Q	A	E	G	G	V	P	M	V	M	D	T	L	E	I	L	G	A	D
Query Conservation																								.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.
Template Conservation
Template Sequence		I	G	S	P	K	M	N	F	L	P	V	K	V	T	A	T	A	I	D	Q	V	Q	V	E	L	P	M	P	N	R	Q	Q	V	W	L	P	V	E	S	R	D	V	Q	V	G	A	N	M	S	L	G	I	R	P	E	H	L	L	P	S	D	I	A	D	V	I	L	E	G	E	V	Q	V	V	E	Q	L	G	N	E
Template Known Secondary structure		S	S	S	S														T	T							S	S	T	T							S	B			T	T			T	T									T	T	T				G	G	G		S	S													S	S
Template Predicted Secondary structure
Template SS confidence
		1443	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.
		309	310	.	.	.	.	.	.	.			.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.			.	350	.	.	.	.	.	.
Predicted Secondary structure											.	.																																.	.
Query SS confidence											.	.																																.	.
Query Sequence		N	L	A	H	G	R	W	G	E	.	.	Q	K	L	V	V	R	L	A	H	Q	E	R	P	T	A	G	S	T	L	W	L	H	L	A	E	N	Q	L	H	L	F	.	.	D	G	E	T	G	Q	R	V
Query Conservation											.	.																																.	.
Alig confidence											.	.																																.	.
Template Conservation
Template Sequence		T	Q	I	H	I	Q	I	P	S	I	R	Q	N	L	V	Y	R	Q	N	D	V	V	L	V	E	E	G	A	T	F	A	I	G	L	P	P	E	R	C	H	L	F	R	E	D	G	T	A	C	R	R	L
Template Known Secondary structure									T	T		S	S								S						T	T									G	G	G						T	T	S	B	B			B
Template Predicted Secondary structure
Template SS confidence
		1523	.	.	.	.	.	.	1530	.	.	.	.	.	.	.	.	.	1540	.	.	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions