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Job DescriptionP10907
Confidence100.00%DateThu Jan 5 11:32:26 GMT 2012
Rank10Aligned Residues336
% Identity35%Templatec3d31B_
PDB info PDB header:transport proteinChain: B: PDB Molecule:sulfate/molybdate abc transporter, atp-binding PDBTitle: modbc from methanosarcina acetivorans
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  LKLQAVTKSWDGKTQVIKPLTLDVADGEFIVMVGPSGCGKSTLLRMVAGLERVTEGDIWINDQRVTEMEPKDRGIAMVFQ
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Template Sequence  IEIESLSRKW. KNF. SLDNLSLKVESGEYFVILGPTGAGKTLFLELIAGFHVPDSGRILLDGKDVTDLSPEKHDIAFVYQ
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   2.......10. ... .....20.........30.........40.........50.........60.........70.........
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  NYALYPHMSVEENMAWGLKIRGMGKQQIAERVKEAARILELDGLLKRRPRELSGGQRQRVAMGRAIVRDPAVFLFDEPLS
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Template Sequence  NYSLFPHMNVKKNLEFGMRMKKIKDPK. . . RVLDTARDLKIEHLLDRNPLTLSGGEQQRVALARALVTNPKILLLDEPLS
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   80.........90.........100...... ...110.........120.........130.........140.........150......
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
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Query Sequence  NLDAKLRVQMRLELQQLHRRLKTTSLYVTHDQVEAMTLAQRVMVMNGGVAEQIGTPVEVYEKPASLFVASFIGSPAMNLL
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Template Sequence  ALDPRTQENAREMLSVLHKKNKLTVLHITHDQTEARIMADRIAVVMDGKLIQVGKPEEIFEKPVEGRVASFVGF. . ENVL
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   157..160.........170.........180.........190.........200.........210.........220.........230 ....
 
   244.....250.........260.........270.........280.........290 .........300.........310........
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Query Sequence  TGRVNNEGTHFELDGGIELPLNGGYRQYAGRKMTLGIRPEHIALSSQ. . . . . AEGGVPMVMDTLEILGADNLAHGRWGEQ
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Template Sequence  KGRVISAEQGLLRIRVGEVVIDAAGDMEVGDQVYAFLRPENIALSKSSTQSSIRNSLQGRVTEAWVLGALVRVKVDCG. V
Template Known Secondary structure  TTTTSS

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   235....240.........250.........260.........270.........280.........290.........300.........310.. .
 
   319320........ .330.........340.......
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Query Sequence  KLVVRLAHQE. . . . RPTAGSTLWLHLAENQLHL
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Template Sequence  PLNVLITRRSAEEMELSPGVQIYARFKASSVHV
Template Known Secondary structure  S


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   314.....320.........330.........340......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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