Job Description P10907 Confidence 100.00% Date Thu Jan 5 11:32:26 GMT 2012 Rank 36 Aligned Residues 220 % Identity 28% Template c2hydB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:abc transporter homolog; PDBTitle: multidrug abc transporter sav1866 Resolution 3.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.
Predicted Secondary structure															.																																																														.	.
Query SS confidence															.																																																														.	.
Query Sequence		A	G	L	K	L	Q	A	V	T	K	S	W	D	.	G	K	T	Q	V	I	K	P	L	T	L	D	V	A	D	G	E	F	I	V	M	V	G	P	S	G	C	G	K	S	T	L	L	R	M	V	A	G	L	E	R	V	T	E	G	D	I	W	I	N	D	Q	R	V	T	E	M	E	P	K	D	.	.	R	G	I
Query Conservation															.																																																														.	.
Alig confidence															.																																																														.	.
Template Conservation
Template Sequence		G	R	I	D	I	D	H	V	S	F	Q	Y	N	D	N	E	A	P	I	L	K	D	I	N	L	S	I	E	K	G	E	T	V	A	F	V	G	M	S	G	G	G	K	S	T	L	I	N	L	I	P	R	F	Y	D	V	T	S	G	Q	I	L	I	D	G	H	N	I	K	D	F	L	T	G	S	L	R	N	Q	I
Template Known Secondary structure													S		S	S	S			S										T	T								S	T	T	S	S						T	T	T	T	T	S	S			S							T	T			G	G	G	S								T
Template Predicted Secondary structure
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.						.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																													.	.	.	.	.
Query SS confidence																																													.	.	.	.	.
Query Sequence		A	M	V	F	Q	N	Y	A	L	Y	P	H	M	S	V	E	E	N	M	A	W	G	L	K	I	R	G	M	G	K	Q	Q	I	A	E	R	V	K	E	A	A	R	I	.	.	.	.	.	L	E	L	D	G	L	L	K	R	R	P	R	E	L	S	G	G	Q	R	Q	R	V	A	M	G	R	A	I	V	R	D	P
Query Conservation																																													.	.	.	.	.
Alig confidence														.																															.	.	.	.	.
Template Conservation														.
Template Sequence		G	L	V	Q	Q	D	N	I	L	F	S	D	.	T	V	K	E	N	I	L	L	G	R	P	T	A	T	D	E	E	V	V	E	A	A	K	M	A	N	A	H	D	F	I	M	N	L	P	Q	G	Y	D	T	E	V	G	E	R	G	V	K	L	S	G	G	Q	K	Q	R	L	S	I	A	R	I	F	L	N	N	P
Template Known Secondary structure						S	S					S	S	.	B						G	G	G		S	S													T	T							T	S	T	T	G	G	G		B			G	G	G	T	T	S
Template Predicted Secondary structure														.
Template SS confidence
		418	.	420	.	.	.	.	.	.	.	.	.		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	F	L	F	D	E	P	L	S	N	L	D	A	K	L	R	V	Q	M	R	L	E	L	Q	Q	L	H	R	R	L	K	T	T	S	L	Y	V	T	H	D	Q	V	E	A	M	T	L	A	Q	R	V	M	V	M	N	G	G	V	A	E	Q	I	G	T	P	V	E	V	Y	E	K
Query Conservation
Alig confidence																															.	.															.
Template Conservation																															.	.															.
Template Sequence		P	I	L	I	L	D	E	A	T	S	A	L	D	L	E	S	E	S	I	I	Q	E	A	L	D	V	L	S	K	.	.	D	R	T	T	L	I	V	A	H	R	L	S	T	I	.	T	H	A	D	K	I	V	V	I	E	N	G	H	I	V	E	T	G	T	H	R	E	L	I	A	K
Template Known Secondary structure		S						S	T	T	T	T																	T	T	.	.	T	S							S	S	G	G	G	T	.	T	T		S							T	T														T
Template Predicted Secondary structure																															.	.															.
Template SS confidence
		497	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.			.	.	.	.	530	.	.	.	.	.	.	.	.	.		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions