Job Description P10907 Confidence 97.57% Date Thu Jan 5 11:32:26 GMT 2012 Rank 123 Aligned Residues 137 % Identity 16% Template c1xp8A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:reca protein; PDBTitle: "deinococcus radiodurans reca in complex with atp-gamma-s" Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	D	G	E	F	I	V	M	V	G	P	S	G	C	G	K	S	T	L	L	R	M	V	A	G	L	E	R	V	T	E	G	D	I	W	I	N	D	Q	R	V	T	E	M	E	P	K	D	R	G	I	A	M	V	F	Q	N	Y	A	L	Y	P	H	M	S	V	E	E	N	M	A	W	G	L	K	I	R	G	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	P	R	G	R	I	T	E	I	Y	G	P	E	S	G	G	K	T	T	L	A	L	A	I	V	A	Q	A	Q	K	A	G	G	T	C	A	F	I	D	A	E	H	A	L	D	P	V	Y	A	R	A	L	G	V	N	T	D	E	L	L	V	S	Q	P	D	N	G	E	Q	A	L	E	I	M	E	L	L	V	R	S
Template Known Secondary structure				T	T	S							S	T	T	S	S															T	T								S	S											T	T			G	G	G							S	S													T	T
Template Predicted Secondary structure
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.									160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.
Query Sequence		G	K	Q	Q	I	A	E	R	V	K	E	A	A	R	I	L	E	L	D	G	L	L	K	R	R	P	R	E	L	S	G	G	Q	R	Q	R	V	A	M	G	R	A	I	V	R	D	P	A	V	F	L	F	D	.	.	.	.	.	.	.	.	E	P	L	S	N	L	D	A	K	L	R	V	Q	M	R	L	E	L	Q
Query Conservation																																																							.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	I	D	V	V	V	V	D	S	V	A	A	L	T	P	R	A	E	I	P	G	L	Q	A	R	L	M	S	Q	A	L	R	K	L	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T			S							T	T	T				S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																														148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	H	R	R	L	K	T	T	S	L	Y	V	T	H	D	Q	V	E	A	M	T	L	A	Q	R	V	M	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	L	S	K	T	G	T	A	A	I	F	I	N	Q	V	G	G	R	A	L	K	F	Y	A	S	V	R	L
Template Known Secondary structure					T	T	T																				S
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions