Email l.a.kelley@imperial.ac.uk Description P0AAS3 Date Thu Jan 5 11:13:40 GMT 2012 Unique Job ID 4573f68575a02432

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2k5hA_ 99.6 22 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved protein; PDBTitle: solution nmr structure of protein encoded by mth693 from2 methanobacterium thermoautotrophicum: northeast structural3 genomics consortium target tt824a 2 d2exda1 99.5 17 Fold:OB-fold Superfamily:NfeD domain-like Family:NfeD domain-like 3 c3cp0A_ 99.4 24 PDB header:membrane protein Chain: A: PDB Molecule:membrane protein implicated in regulation of membrane PDBTitle: crystal structure of the soluble domain of membrane protein implicated2 in regulation of membrane protease activity from corynebacterium3 glutamicum 4 c2k14A_ 99.0 19 PDB header:unknown function Chain: A: PDB Molecule:yuaf protein; PDBTitle: solution structure of the soluble domain of the nfed2 protein yuaf from bacillus subtilis 5 c3fjsC_ 42.6 26 PDB header:biosynthetic protein Chain: C: PDB Molecule:uncharacterized protein with rmlc-like cupin fold; PDBTitle: crystal structure of a putative biosynthetic protein with rmlc-like2 cupin fold (reut_b4087) from ralstonia eutropha jmp134 at 1.90 a3 resolution 6 d1mvfd_ 42.6 29 Fold:Double-split beta-barrel Superfamily:AbrB/MazE/MraZ-like Family:Kis/PemI addiction antidote 7 c3e0eA_ 41.3 28 PDB header:replication Chain: A: PDB Molecule:replication protein a; PDBTitle: crystal structure of a domain of replication protein a from2 methanococcus maripaludis. northeast structural genomics3 targe mrr110b 8 d1xrua1 36.9 23 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:KduI-like 9 c2nv4A_ 35.7 25 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0066 protein af_0241; PDBTitle: crystal structure of upf0066 protein af0241 in complex with2 s-adenosylmethionine. northeast structural genomics3 consortium target gr27 10 c1ywkE_ 35.5 14 PDB header:isomerase Chain: E: PDB Molecule:4-deoxy-l-threo-5-hexosulose-uronate ketol- PDBTitle: crystal structure of 4-deoxy-1-threo-5-hexosulose-uronate2 ketol-isomerase from enterococcus faecalis 11 c3a5zF_ 32.3 22 PDB header:ligase Chain: F: PDB Molecule:elongation factor p; PDBTitle: crystal structure of escherichia coli genx in complex with elongation2 factor p 12 d1ywka1 28.4 14 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:KduI-like 13 c2p0pA_ 27.0 15 PDB header:metal binding protein Chain: A: PDB Molecule:alr1010 protein; PDBTitle: calcium binding protein in the free form 14 d1nppa2 26.5 21 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:N-utilization substance G protein NusG, C-terminal domain 15 c2e6zA_ 26.0 27 PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt5; PDBTitle: solution structure of the second kow motif of human2 transcription elongation factor spt5 16 c3okxA_ 24.9 25 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:yaeb-like protein rpa0152; PDBTitle: crystal structure of yaeb-like protein from rhodopseudomonas palustris 17 c2yv5A_ 24.6 14 PDB header:hydrolase Chain: A: PDB Molecule:yjeq protein; PDBTitle: crystal structure of yjeq from aquifex aeolicus 18 d1ueba1 24.4 15 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:eIF5a N-terminal domain-like 19 c2ozjB_ 24.2 8 PDB header:unknown function Chain: B: PDB Molecule:cupin 2, conserved barrel; PDBTitle: crystal structure of a cupin superfamily protein (dsy2733) from2 desulfitobacterium hafniense dcb-2 at 1.60 a resolution 20 d1nnxa_ 23.9 13 Fold:OB-fold Superfamily:Hypothetical protein YgiW Family:Hypothetical protein YgiW 21 d1nz9a_ not modelled 23.9 18 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:N-utilization substance G protein NusG, C-terminal domain 22 d1x6oa1 not modelled 23.7 18 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:eIF5a N-terminal domain-like 23 d2huha1 not modelled 23.7 8 Fold:C2 domain-like Superfamily:Smr-associated domain-like Family:Smr-associated domain 24 d1ub4c_ not modelled 21.8 22 Fold:Double-split beta-barrel Superfamily:AbrB/MazE/MraZ-like Family:Kis/PemI addiction antidote 25 c2qjlA_ not modelled 21.8 16 PDB header:signaling protein Chain: A: PDB Molecule:ubiquitin-related modifier 1; PDBTitle: crystal structure of urm1 26 d1vfsa1 not modelled 21.5 18 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Alanine racemase C-terminal domain-like Family:Alanine racemase 27 c2k6pA_ not modelled 21.1 29 PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein hp_1423; PDBTitle: solution structure of hypothetical protein, hp1423 28 d1v43a2 not modelled 20.9 26 Fold:OB-fold Superfamily:MOP-like Family:ABC-transporter additional domain 29 d2fo0a1 not modelled 20.9 13 Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain 30 d1tkea1 not modelled 20.8 17 Fold:beta-Grasp (ubiquitin-like) Superfamily:TGS-like Family:TGS domain 31 d1u0la1 not modelled 20.7 24 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 32 d1wgka_ not modelled 20.0 16 Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:C9orf74 homolog 33 d1xo3a_ not modelled 19.7 16 Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:C9orf74 homolog 34 d1orua_ not modelled 19.6 16 Fold:PK beta-barrel domain-like Superfamily:PK beta-barrel domain-like Family:MOSC (MOCO sulphurase C-terminal) domain 35 d1k25a2 not modelled 19.5 8 Fold:Penicillin-binding protein 2x (pbp-2x), c-terminal domain Superfamily:Penicillin-binding protein 2x (pbp-2x), c-terminal domain Family:Penicillin-binding protein 2x (pbp-2x), c-terminal domain 36 c2kvqG_ not modelled 19.2 16 PDB header:transcription Chain: G: PDB Molecule:transcription antitermination protein nusg; PDBTitle: solution structure of nuse:nusg-ctd complex 37 c2jvvA_ not modelled 19.2 16 PDB header:transcription Chain: A: PDB Molecule:transcription antitermination protein nusg; PDBTitle: solution structure of e. coli nusg carboxyterminal domain 38 c1xtdA_ not modelled 18.5 19 PDB header:translation Chain: A: PDB Molecule:eukaryotic initiation factor 5a; PDBTitle: structural analysis of leishmania mexicana eukaryotic initiation2 factor 5a 39 d1wfwa_ not modelled 18.5 16 Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain 40 d1tq5a1 not modelled 17.9 7 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Pirin-like 41 d1yhfa1 not modelled 17.7 16 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:TM1287-like 42 c1bkbA_ not modelled 17.6 19 PDB header:translation Chain: A: PDB Molecule:translation initiation factor 5a; PDBTitle: initiation factor 5a from archebacterium pyrobaculum2 aerophilum 43 d1whoa_ not modelled 17.3 14 Fold:C2 domain-like Superfamily:PHL pollen allergen Family:PHL pollen allergen 44 d2vv5a1 not modelled 17.3 22 Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Mechanosensitive channel protein MscS (YggB), middle domain 45 c2pfwB_ not modelled 17.2 16 PDB header:unknown function Chain: B: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of a rmlc-like cupin (sfri_3105) from shewanella2 frigidimarina ncimb 400 at 1.90 a resolution 46 c2k9xA_ not modelled 17.0 29 PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution structure of urm1 from trypanosoma brucei 47 c3b9bA_ not modelled 16.9 16 PDB header:hydrolase Chain: A: PDB Molecule:sarcoplasmic/endoplasmic reticulum calcium PDBTitle: structure of the e2 beryllium fluoride complex of the serca2 ca2+-atpase 48 c3di4A_ not modelled 16.3 27 PDB header:metal binding protein Chain: A: PDB Molecule:uncharacterized protein duf1989; PDBTitle: crystal structure of a duf1989 family protein (spo0365) from2 silicibacter pomeroyi dss-3 at 1.60 a resolution 49 c3oyyA_ not modelled 16.2 15 PDB header:translation Chain: A: PDB Molecule:elongation factor p; PDBTitle: structure of pseudomonas aeruginosa elongation factor p 50 c2i0nA_ not modelled 15.8 9 PDB header:structural protein Chain: A: PDB Molecule:class vii unconventional myosin; PDBTitle: structure of dictyostelium discoideum myosin vii sh3 domain2 with adjacent proline rich region 51 c3fn2A_ not modelled 15.3 29 PDB header:transferase Chain: A: PDB Molecule:putative sensor histidine kinase domain; PDBTitle: crystal structure of a putative sensor histidine kinase domain from2 clostridium symbiosum atcc 14940 52 d2pi2a1 not modelled 15.1 20 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Single strand DNA-binding domain, SSB 53 c3treA_ not modelled 14.9 15 PDB header:translation Chain: A: PDB Molecule:elongation factor p; PDBTitle: structure of a translation elongation factor p (efp) from coxiella2 burnetii 54 d1ue9a_ not modelled 14.7 22 Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain 55 c1vftA_ not modelled 14.7 17 PDB header:isomerase Chain: A: PDB Molecule:alanine racemase; PDBTitle: crystal structure of l-cycloserine-bound form of alanine2 racemase from d-cycloserine-producing streptomyces3 lavendulae 56 c3e0jG_ not modelled 14.2 13 PDB header:transferase Chain: G: PDB Molecule:dna polymerase subunit delta-2; PDBTitle: x-ray structure of the complex of regulatory subunits of2 human dna polymerase delta 57 c3oruA_ not modelled 14.1 27 PDB header:metal binding protein Chain: A: PDB Molecule:duf1989 family protein; PDBTitle: crystal structure of a duf1989 family protein (tm1040_0329) from2 silicibacter sp. tm1040 at 1.11 a resolution 58 d2gcxa1 not modelled 14.0 0 Fold:SH3-like barrel Superfamily:C-terminal domain of transcriptional repressors Family:FeoA-like 59 c2jw4A_ not modelled 13.8 6 PDB header:signaling protein Chain: A: PDB Molecule:cytoplasmic protein nck1; PDBTitle: nmr solution structure of the n-terminal sh3 domain of2 human nckalpha 60 d1dm9a_ not modelled 13.6 11 Fold:Alpha-L RNA-binding motif Superfamily:Alpha-L RNA-binding motif Family:Heat shock protein 15 kD 61 c1dm9A_ not modelled 13.6 11 PDB header:structural genomics Chain: A: PDB Molecule:hypothetical 15.5 kd protein in mrca-pcka PDBTitle: heat shock protein 15 kd 62 d1zud21 not modelled 13.3 9 Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:ThiS 63 c3hksB_ not modelled 13.1 19 PDB header:translation, rna binding protein Chain: B: PDB Molecule:eukaryotic translation initiation factor 5a-2; PDBTitle: crystal structure of eukaryotic translation initiation2 factor eif-5a2 from arabidopsis thaliana 64 d1tygb_ not modelled 12.8 14 Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:ThiS 65 d1nyra2 not modelled 12.8 9 Fold:beta-Grasp (ubiquitin-like) Superfamily:TGS-like Family:TGS domain 66 c2j6kE_ not modelled 12.4 4 PDB header:protein binding Chain: E: PDB Molecule:cd2-associated protein; PDBTitle: n-terminal sh3 domain of cms (cd2ap human homolog) 67 c2dy3B_ not modelled 12.2 17 PDB header:isomerase Chain: B: PDB Molecule:alanine racemase; PDBTitle: crystal structure of alanine racemase from corynebacterium glutamicum 68 c3lwcA_ not modelled 12.1 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of structural genomics, unknown function2 (yp_766765.1) from rhizobium leguminosarum bv. viciae 3841 at 1.40 a3 resolution 69 d1wlpb1 not modelled 11.9 26 Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain 70 c2eifA_ not modelled 11.5 15 PDB header:gene regulation Chain: A: PDB Molecule:protein (eukaryotic translation initiation factor 5a); PDBTitle: eukaryotic translation initiation factor 5a from methanococcus2 jannaschii 71 c3cwiA_ not modelled 11.1 16 PDB header:biosynthetic protein Chain: A: PDB Molecule:thiamine-biosynthesis protein this; PDBTitle: crystal structure of thiamine biosynthesis protein (this)2 from geobacter metallireducens. northeast structural3 genomics consortium target gmr137 72 d1j3ta_ not modelled 11.1 7 Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain 73 c3dwmA_ not modelled 10.9 19 PDB header:transferase Chain: A: PDB Molecule:9.5 kda culture filtrate antigen cfp10a; PDBTitle: crystal structure of mycobacterium tuberculosis cyso, an antigen 74 c1ybyB_ not modelled 10.8 15 PDB header:translation Chain: B: PDB Molecule:translation elongation factor p; PDBTitle: conserved hypothetical protein cth-95 from clostridium2 thermocellum 75 c1uebB_ not modelled 10.6 15 PDB header:rna binding protein Chain: B: PDB Molecule:elongation factor p; PDBTitle: crystal structure of translation elongation factor p from2 thermus thermophilus hb8 76 d1ueba3 not modelled 10.4 20 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 77 c3gf5A_ not modelled 10.3 18 PDB header:structural protein Chain: A: PDB Molecule:major vault protein; PDBTitle: crystal structure of the p21 r1-r7 n-terminal domain of murine mvp 78 d1bkba1 not modelled 10.2 20 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:eIF5a N-terminal domain-like 79 d1iz6a1 not modelled 10.2 19 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:eIF5a N-terminal domain-like 80 c3k3sG_ not modelled 10.1 20 PDB header:hydrolase Chain: G: PDB Molecule:altronate hydrolase; PDBTitle: crystal structure of altronate hydrolase (fragment 1-84) from shigella2 flexneri. 81 c1iz6B_ not modelled 10.0 19 PDB header:biosynthetic protein Chain: B: PDB Molecule:initiation factor 5a; PDBTitle: crystal structure of translation initiation factor 5a from pyrococcus2 horikoshii 82 c3i4oA_ not modelled 10.0 15 PDB header:translation Chain: A: PDB Molecule:translation initiation factor if-1; PDBTitle: crystal structure of translation initiation factor 1 from2 mycobacterium tuberculosis 83 d2as0a1 not modelled 10.0 35 Fold:PUA domain-like Superfamily:PUA domain-like Family:Hypothetical RNA methyltransferase domain (HRMD) 84 d1oqka_ not modelled 10.0 13 Fold:Rof/RNase P subunit-like Superfamily:Rof/RNase P subunit-like Family:RNase P subunit p29-like 85 d1vqot1 not modelled 9.5 15 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:Ribosomal proteins L24p and L21e 86 c2rqrA_ not modelled 9.3 23 PDB header:protein binding Chain: A: PDB Molecule:engulfment and cell motility protein 1, linker, dedicator PDBTitle: the solution structure of human dock2 sh3 domain - elmo1 peptide2 chimera complex 87 c2kymA_ not modelled 9.2 14 PDB header:signaling protein Chain: A: PDB Molecule:bud emergence protein 1; PDBTitle: solution structure of the bem1p sh3-ci domain from l.elongisporus in2 complex with ste20p peptide 88 d1psea_ not modelled 9.2 23 Fold:SH3-like barrel Superfamily:Electron transport accessory proteins Family:Photosystem I accessory protein E (PsaE) 89 c1y7xA_ not modelled 9.2 11 PDB header:structural protein, protein binding Chain: A: PDB Molecule:major vault protein; PDBTitle: solution structure of a two-repeat fragment of major vault2 protein 90 d2d40a1 not modelled 9.2 18 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Gentisate 1,2-dioxygenase-like 91 c1tygG_ not modelled 9.2 14 PDB header:biosynthetic protein Chain: G: PDB Molecule:yjbs; PDBTitle: structure of the thiazole synthase/this complex 92 c2jlnA_ not modelled 9.1 21 PDB header:membrane protein Chain: A: PDB Molecule:mhp1; PDBTitle: structure of mhp1, a nucleobase-cation-symport-1 family2 transporter 93 c1zlmA_ not modelled 9.1 5 PDB header:signaling protein Chain: A: PDB Molecule:osteoclast stimulating factor 1; PDBTitle: crystal structure of the sh3 domain of human osteoclast2 stimulating factor 94 c3p8bB_ not modelled 9.0 30 PDB header:transferase/transcription Chain: B: PDB Molecule:transcription antitermination protein nusg; PDBTitle: x-ray crystal structure of pyrococcus furiosus transcription2 elongation factor spt4/5 95 d1m1ha1 not modelled 8.9 15 Fold:N-utilization substance G protein NusG, insert domain Superfamily:N-utilization substance G protein NusG, insert domain Family:N-utilization substance G protein NusG, insert domain 96 d1uhfa_ not modelled 8.9 14 Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain 97 c4a1cS_ not modelled 8.8 10 PDB header:ribosome Chain: S: PDB Molecule:rpl26; PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 4. 98 c2kq8A_ not modelled 8.7 27 PDB header:hydrolase Chain: A: PDB Molecule:cell wall hydrolase; PDBTitle: solution nmr structure of a domain from bt9727_4915 from2 bacillus thuringiensis, northeast structural genomics3 consortium target bur95a 99 c2k6dA_ not modelled 8.5 14 PDB header:sh3 domain/ubiquitin Chain: A: PDB Molecule:sh3 domain-containing kinase-binding protein 1; PDBTitle: cin85 sh3-c domain in complex with ubiquitin