 |
Job Description | P0ACJ0 | Confidence | 77.85% | Date | Thu Jan 5 11:18:17 GMT 2012 |
Rank | 427 | Aligned Residues | 85 |
% Identity | 9% | Template | c3l7oB_ |
PDB info |
PDB header:isomerase | Chain: B: PDB Molecule:ribose-5-phosphate isomerase a; |
PDBTitle: crystal structure of ribose-5-phosphate isomerase a from streptococcus2 mutans ua159
|
Resolution | 1.70 Å |
|
 |
  |   |
59 | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | |
. | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | |
|
|
. | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|  |  |  |  |
|
|
|
|
|
| . |
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  | . | . | . |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | G | Y | T | A | L | L | N | P | H | Y | L | D | A | S | L | L | V | . |
F | V | E | I | T | L | N | R | G | A | P | D | V | F | E | Q | F | N | T | A | V | Q | K | L | E | E | I | Q | E | C | . |
. |
. |
H | L | V | S | G | D | F | D | Y | L | L | K | T | R | V | P | D | M | S | A | Y | R | K | L | L | G | E | T |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   | . |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   | . | . | . |   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|
|
|   |
|
|   |
|   |   |
|
|   |   |
|
|
|
|
|
|   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|   |
|
|
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |
|   |   |   | . |
|   |   |   |
Template Sequence |   |
K | D | Y | I | W | V | V | D | E | S | K | M | V | D | T | L | G | A | F | R | L | P | V | E | V | V | Q | Y | G | A | E | R | L | F | R | E | F | E | K | K | G | Y | K | P | S | F | R | E | Y | D | G | V | R | F | V | T | D | M | K | N | F | I | I | D | L | D | L | G | S | I | P | D | P | I | A | . |
F | G | N | M |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | G | G | G | B |
| S | S | T | T | S | S |
|  |  |  |  |  |
| S | T | T |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |
|  |  | T | T |  |  |
|
|
| T | T | S |
|  |  |  |  |  |
|
| S |
|
| S |
|  |  |  | . |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  | . |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
112 | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | |
. | . | . | 190 |
  |
  |   |
135 | . | . | . | . | 140 | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | L | R | L | P | G | V | N | D | T |
Query Conservation |   |
|   |   |   |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |
|
|
|
|   |
Template Sequence |   |
L | D | H | Q | V | G | V | V | E | H |
Template Known Secondary structure |   |
 | T | T | S | T | T |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
  |   |
191 | . | . | . | . | . | . | . | . | 200 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|