Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACJ0
Confidence94.60%DateThu Jan 5 11:18:17 GMT 2012
Rank201Aligned Residues50
% Identity16%Templatec3klnC_
PDB info PDB header:transcriptionChain: C: PDB Molecule:transcriptional regulator, luxr family; PDBTitle: vibrio cholerae vpst
Resolution3.08 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50....
Predicted Secondary structure 


















Query SS confidence 



















































Query Sequence  DSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLER
Query Conservation      
    

  
  

  
  
 
 
   

  



  

  

  
  
Alig confidence 























..

























Template Conservation           

 

  

  
  
.. 
   

  
 

  

  

  
  
Template Sequence  VVTSQMYAKLTKREQQIIKLLGSG. . ASNIEIADKLFVSENTVKTHLHNVFK
Template Known Secondary structure 



TTGGGS
TT..

TTTT

Template Predicted Secondary structure 








..




Template SS confidence 



















































   150.........160.........170... ......180.........190.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions