Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACJ0
Confidence71.20%DateThu Jan 5 11:18:17 GMT 2012
Rank494Aligned Residues41
% Identity15%Templatec2a6eF_
PDB info PDB header:transferaseChain: F: PDB Molecule:rna polymerase sigma factor rpod; PDBTitle: crystal structure of the t. thermophilus rna polymerase2 holoenzyme
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30.........40.........50....
Predicted Secondary structure 









Query SS confidence 










































Query Sequence  LDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLER
Query Conservation 

  
  

  
  
 
 
   

  



  

  

  
  
Alig confidence 















..
























Template Conservation 
  


 

 



  ..
  


  











 


 
Template Sequence  LSEREAMVLKLRKGLI. . DGEEVGAFFGVTRERIRQIENKALR
Template Known Secondary structure  S
TTTT..


SSSS
Template Predicted Secondary structure 




..



Template SS confidence 










































   361........370...... ...380.........390.........400.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions