Job Description P0ACJ0 Confidence 96.07% Date Thu Jan 5 11:18:17 GMT 2012 Rank 132 Aligned Residues 81 % Identity 15% Template c1p4xA_ PDB info PDB header:transcription Chain: A: PDB Molecule:staphylococcal accessory regulator a homologue; PDBTitle: crystal structure of sars protein from staphylococcus aureus Resolution 2.20 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence		D	L	D	R	I	D	R	N	I	L	N	E	L	Q	K	D	G	R	.	.	I	S	N	V	E	L	S	K	R	V	G	L	S	P	T	P	C	L	E	R	V	R	R	L	E	R	Q	G	F	I	Q	G	Y	T	A	L	L	N	P	H	Y	L	D	A	S	L	L	V	F	V	E	I	T	L	N	R	G	A	P	D
Query Conservation																				.	.
Alig confidence																				.	.																																								.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.
Template Sequence		T	L	S	F	V	E	F	T	I	L	A	I	I	T	S	Q	N	K	N	I	V	L	L	K	D	L	I	E	T	I	H	H	K	Y	P	Q	T	V	R	A	L	N	N	L	K	K	Q	G	Y	L	I	K	E	R	S	T	E	D	E	.	.	.	.	.	.	.	.	R	K	I	L	I	H	M	D	D	A	Q	Q	D
Template Known Secondary structure		S	S													T	T	T	T												S	S	S																T	S	S						S	S	S	T	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.									.	.	.	.	.	.	220	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	E	Q	F	N	T	A	V	Q	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	A	E	Q	L	L	A	Q	V	N	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions