Return to main results Retrieve Phyre Job Id

Job DescriptionP23873
Confidence56.06%DateThu Jan 5 11:40:11 GMT 2012
Rank400Aligned Residues37
% Identity11%Templated2frha1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20..... ....30.........40.....
Predicted Secondary structure 


.




Query SS confidence 
















.



















Query Sequence  SPTQLANAMKLVRQQNG. WTQSELAKKIGIKQATISNF
Query Conservation      

  

  
   
.


 


   


   

  
Alig confidence 
















.



















Template Conservation 
  
  

  
        
  


  
      

  
Template Sequence  SFEEFAVLTYISENKEKEYYLKDIINHLNYKQPQVVKA
Template Known Secondary structure 
T

SSSS
Template Predicted Secondary structure 









Template SS confidence 





































   133......140.........150.........160.........170
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions