Return to main results Retrieve Phyre Job Id

Job DescriptionP23873
Confidence99.57%DateThu Jan 5 11:40:11 GMT 2012
Rank24Aligned Residues58
% Identity21%Templatec3eusB_
PDB info PDB header:dna binding proteinChain: B: PDB Molecule:dna-binding protein; PDBTitle: the crystal structure of the dna binding protein from silicibacter2 pomeroyi
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60........
Predicted Secondary structure 
















Query SS confidence 

























































Query Sequence  TQLANAMKLVRQQNGWTQSELAKKIGIKQATISNFENNPDNTTLTTFFKILQSLELSM
Query Conservation    

  

  
   



 


   


   

  
 
   
    
  
   
 
  
Alig confidence 

























































Template Conservation    
   

  
   



  

   
 
   

  
 
        
  
   


  
Template Sequence  VYLCQRLRQARLDAGLTQADLAERLDKPQSFVAKVETRERRLDVIEFAKWMAACEGLD
Template Known Secondary structure  TT

TS
TTSS


TT
GG
Template Predicted Secondary structure 

















Template SS confidence 

























































   11........20.........30.........40.........50.........60........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions