Job Description P0CF47 Confidence 58.07% Date Thu Jan 5 11:31:02 GMT 2012 Rank 422 Aligned Residues 44 % Identity 11% Template d2lfba_ SCOP info DNA/RNA-binding 3-helical bundle Homeodomain-like Homeodomain Resolution UNK

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.					.	.	30	.	.	.	.	.	.	.	.	.																						40	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	P	E	K	R	R	R	R	T	T	Q	E	K	I	A	I	V	Q	Q	S	F	E	.	.	.	.	P	G	M	T	V	S	L	V	A	R	Q	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	A	A	S	Q	L	F	L	W
Query Conservation																								.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	R	R	N	R	F	K	W	G	P	A	S	Q	Q	I	L	F	Q	A	Y	E	R	Q	K	N	P	S	K	E	E	R	E	T	L	V	E	E	C	N	R	A	E	C	I	Q	R	G	V	S	P	S	Q	A	Q	G	L	G	S	N	L	V	T	E	V	R	V	Y	N	W
Template Known Secondary structure		S	S		S	S																T	T		S	S			S																			T			G	G	G	G	G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions