 |
Job Description | P0CF47 | Confidence | 97.69% | Date | Thu Jan 5 11:31:02 GMT 2012 |
Rank | 13 | Aligned Residues | 59 |
% Identity | 14% | Template | d2coba1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| Homeodomain-like
| Psq domain
|
Resolution | UNK |
|
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | K | R | R | R | R | T | T | Q | E | K | I | A | I | V | Q | Q | S | F | E | P | G | M | T | V | S | L | V | A | R | Q | H | G | V | A | A | S | Q | L | F | L | W | R | K | Q | Y | Q | E | G | S | L | T | A | V | A | A | G | E | Q |
Query Conservation |   |
  |
|
|
|   |
|
|   |
|
|
|   |   |
|
|   |   |   |   |   |   |
|   |
|
|   |
|
|
|
|   |   |
|
|   |   |
|   |
|   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |
|
|   |
|   |
|   |   |
|
|   |
|
|   |   |
|   |
|
|   |   |   |
|
|   |   |
|
|
|
|   |
|
|
|   |   |
|
|
|   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |
Template Sequence |   |
G | R | Y | R | Q | Y | N | S | E | I | L | E | E | A | I | S | V | V | M | S | G | K | M | S | V | S | K | A | Q | S | I | Y | G | I | P | H | S | T | L | E | Y | K | V | K | E | R | L | G | T | L | K | N | P | P | K | K | K | M | K |
Template Known Secondary structure |   |
|
| S |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | S | S |
|
|
| S |
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . |
  |
Send structure to FirstGlance for more viewing options
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|