Return to main results Retrieve Phyre Job Id

Job DescriptionP0CF47
Confidence82.86%DateThu Jan 5 11:31:02 GMT 2012
Rank162Aligned Residues40
% Identity8%Templated2cfxa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Lrp/AsnC-like transcriptional regulator N-terminal domain
Resolution2.4

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920....... ..30.........40.........50........
Predicted Secondary structure  .









Query SS confidence 








.






























Query Sequence  IAIVQQSFE. PGMTVSLVARQHGVAASQLFLWRKQYQEGSL
Query Conservation    

     . 
 

 



  

  
 
  
 
   
   
Alig confidence 








.






























Template Conservation    

  
  
 
 
  


  



  

  

  
   

Template Sequence  LNIIEELKKDSRLSMRELGRKIKLSPPSVTERVRQLESFGI
Template Known Secondary structure 
S


T

TTS
Template Predicted Secondary structure 










Template SS confidence 








































   8.10.........20.........30.........40........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions